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The map label for this gene is vanW [H]

Identifier: 124022891

GI number: 124022891

Start: 1040445

End: 1041257

Strand: Reverse

Name: vanW [H]

Synonym: P9303_11841

Alternate gene names: 124022891

Gene position: 1041257-1040445 (Counterclockwise)

Preceding gene: 124022894

Following gene: 124022889

Centisome position: 38.81

GC content: 54.49

Gene sequence:

>813_bases
ATGTTTGAAATTCCCAAACCGATTCACCGCAGCAGGGTTCGACAACTGTTGGGCCGGGAATATCACATCGCCAGACGCAA
AGCCAACTGGCTGTTCGGTTCCAGACAATGGGCGACAACACGCGACGTCCTGGCGGCAAGCCACCGCAAATTCAGCCATC
AGTCTCTGATCCTGCGCCCTTTAAGGGATGTGGATATGGTGCTTCAGCACAACAAGCGCAGGAATCTGGAGCTAGCGCTT
GCGCAACTGGATCGAATCCTGATTCGTCCGGGGGAAACAATGTCCGTGTGGAAGCTGGTCGGACGACCCACTAGACGGAA
GGGCTATCTGGAGGGTCTGGTGTTGAATCAGGGCAGGGTGTCCAGGGGGACAGGAGGAGGGCTTTGTCAGCTGGGAAATC
TGCTGTTCTGGATAGCGGCCCACAGTCCGCTCACGATTTCAGAGCGCTGGAGGCATGGTTTTGATGTGTTCCCGGATGTG
AATCGAACCATTCCCTTTGGTGCCGGAGCAACTCTGGCGTACAACTATGTGGATCTGCAGATCACCAACAACACGCCCTA
TTGCTTCACGATTCATCTATGGCTGGATGACATCCATCTGCATGGTGAACTCTGCTGTGATGAGGATTACGACTGCATCT
ACAGCGTCGAGGAGCGTCATCACAGGATCCAGCAGCAGATCTGGGGCGGCTATTCGAGACACAATCAGCTCTATCGGATC
TGCACAGCATCCGATGGTGGTAAGACGGAACAGCTACTGGTGGAAAATCACGCGATCATGATGTACGCGCCGTTGATGAA
AGCGGCGCCATGA

Upstream 100 bases:

>100_bases
GCTTTGCAGGCCTAATCACTTTTAACAGCCTCGCCTTTGACCAGTCTTGTCAGAATGAACAGCCTGGTCGGTTCAAAACG
AGATAACTCAGGGCTCAGCG

Downstream 100 bases:

>100_bases
TGCCGTGATACTGAACGAATCTCAGCCTGTTGAATCGTCATCGCCAATCCCTTGAGAATCGCTAGCTAGCTAGCTAGCCA
ACCAAGGCCACTGGATCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MFEIPKPIHRSRVRQLLGREYHIARRKANWLFGSRQWATTRDVLAASHRKFSHQSLILRPLRDVDMVLQHNKRRNLELAL
AQLDRILIRPGETMSVWKLVGRPTRRKGYLEGLVLNQGRVSRGTGGGLCQLGNLLFWIAAHSPLTISERWRHGFDVFPDV
NRTIPFGAGATLAYNYVDLQITNNTPYCFTIHLWLDDIHLHGELCCDEDYDCIYSVEERHHRIQQQIWGGYSRHNQLYRI
CTASDGGKTEQLLVENHAIMMYAPLMKAAP

Sequences:

>Translated_270_residues
MFEIPKPIHRSRVRQLLGREYHIARRKANWLFGSRQWATTRDVLAASHRKFSHQSLILRPLRDVDMVLQHNKRRNLELAL
AQLDRILIRPGETMSVWKLVGRPTRRKGYLEGLVLNQGRVSRGTGGGLCQLGNLLFWIAAHSPLTISERWRHGFDVFPDV
NRTIPFGAGATLAYNYVDLQITNNTPYCFTIHLWLDDIHLHGELCCDEDYDCIYSVEERHHRIQQQIWGGYSRHNQLYRI
CTASDGGKTEQLLVENHAIMMYAPLMKAAP
>Mature_270_residues
MFEIPKPIHRSRVRQLLGREYHIARRKANWLFGSRQWATTRDVLAASHRKFSHQSLILRPLRDVDMVLQHNKRRNLELAL
AQLDRILIRPGETMSVWKLVGRPTRRKGYLEGLVLNQGRVSRGTGGGLCQLGNLLFWIAAHSPLTISERWRHGFDVFPDV
NRTIPFGAGATLAYNYVDLQITNNTPYCFTIHLWLDDIHLHGELCCDEDYDCIYSVEERHHRIQQQIWGGYSRHNQLYRI
CTASDGGKTEQLLVENHAIMMYAPLMKAAP

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007391 [H]

Pfam domain/function: PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 31276; Mature: 31276

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEIPKPIHRSRVRQLLGREYHIARRKANWLFGSRQWATTRDVLAASHRKFSHQSLILRP
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LRDVDMVLQHNKRRNLELALAQLDRILIRPGETMSVWKLVGRPTRRKGYLEGLVLNQGRV
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCC
SRGTGGGLCQLGNLLFWIAAHSPLTISERWRHGFDVFPDVNRTIPFGAGATLAYNYVDLQ
CCCCCCCHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
ITNNTPYCFTIHLWLDDIHLHGELCCDEDYDCIYSVEERHHRIQQQIWGGYSRHNQLYRI
EECCCCEEEEEEEEEEEEEECCEEECCCCCHHEEHHHHHHHHHHHHHCCCHHHCCEEEEE
CTASDGGKTEQLLVENHAIMMYAPLMKAAP
EECCCCCCCCEEEEECCEEEEEECHHHCCC
>Mature Secondary Structure
MFEIPKPIHRSRVRQLLGREYHIARRKANWLFGSRQWATTRDVLAASHRKFSHQSLILRP
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
LRDVDMVLQHNKRRNLELALAQLDRILIRPGETMSVWKLVGRPTRRKGYLEGLVLNQGRV
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCC
SRGTGGGLCQLGNLLFWIAAHSPLTISERWRHGFDVFPDVNRTIPFGAGATLAYNYVDLQ
CCCCCCCHHHHHCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEE
ITNNTPYCFTIHLWLDDIHLHGELCCDEDYDCIYSVEERHHRIQQQIWGGYSRHNQLYRI
EECCCCEEEEEEEEEEEEEECCEEECCCCCHHEEHHHHHHHHHHHHHCCCHHHCCEEEEE
CTASDGGKTEQLLVENHAIMMYAPLMKAAP
EECCCCCCCCEEEEECCEEEEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631706; 12663927 [H]