| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022872
Identifier: 124022872
GI number: 124022872
Start: 1028129
End: 1028452
Strand: Direct
Name: 124022872
Synonym: P9303_11651
Alternate gene names: NA
Gene position: 1028129-1028452 (Clockwise)
Preceding gene: 124022871
Following gene: 124022873
Centisome position: 38.32
GC content: 44.44
Gene sequence:
>324_bases ATGTCGATGATGATTCCTATGACGAAGTTGATGAGTACCTCAGCAGCCAAGAATCTGATGAGGAAGAACATGCTTACTTT CCAGTTCAAGACTCAAAGCCGCCTCACTACTGAGACACTTGTCTTTGAAAAGATCAATAAGAATTTGAAATCTCAATTGC CTTCGAGAACCTTTGATCGATGGCGGCAGATAATTAAAGACTTTTGTGCCAAGGGATGTGCCGCTTATAGGCAAGGCACG ATTGACACGCAGATGATCATTGGCTGCCATGACAACCTCAACCGTGCCCTTCTGAAGGAACTAAAAGGACTGGGAGAGAA CTGA
Upstream 100 bases:
>100_bases TGCCCTACGCTTCTTCCTCCTATCACCATGAGATGTGATCAGGCAAAATTGAGTTAGATGAGATCAAATGGAGGTTTAGG CGTGACTGTTCACGAAAGAG
Downstream 100 bases:
>100_bases TGGGGCACTTGCACTGGAGTTATCTCGAAGTTGGTTTGCTGGTTGTTTTCTACTGGGGTTTGATGATTTGGTGGATCAGG AGAGCTAAGAGAAAGCAAGA
Product: chromo' (chromatin organization modifier) domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSMMIPMTKLMSTSAAKNLMRKNMLTFQFKTQSRLTTETLVFEKINKNLKSQLPSRTFDRWRQIIKDFCAKGCAAYRQGT IDTQMIIGCHDNLNRALLKELKGLGEN
Sequences:
>Translated_107_residues MSMMIPMTKLMSTSAAKNLMRKNMLTFQFKTQSRLTTETLVFEKINKNLKSQLPSRTFDRWRQIIKDFCAKGCAAYRQGT IDTQMIIGCHDNLNRALLKELKGLGEN >Mature_106_residues SMMIPMTKLMSTSAAKNLMRKNMLTFQFKTQSRLTTETLVFEKINKNLKSQLPSRTFDRWRQIIKDFCAKGCAAYRQGTI DTQMIIGCHDNLNRALLKELKGLGEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12336; Mature: 12205
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMMIPMTKLMSTSAAKNLMRKNMLTFQFKTQSRLTTETLVFEKINKNLKSQLPSRTFDR CCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH WRQIIKDFCAKGCAAYRQGTIDTQMIIGCHDNLNRALLKELKGLGEN HHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SMMIPMTKLMSTSAAKNLMRKNMLTFQFKTQSRLTTETLVFEKINKNLKSQLPSRTFDR CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHH WRQIIKDFCAKGCAAYRQGTIDTQMIIGCHDNLNRALLKELKGLGEN HHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA