| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022857
Identifier: 124022857
GI number: 124022857
Start: 1020837
End: 1021622
Strand: Reverse
Name: 124022857
Synonym: P9303_11501
Alternate gene names: NA
Gene position: 1021622-1020837 (Counterclockwise)
Preceding gene: 124022859
Following gene: 124022856
Centisome position: 38.08
GC content: 55.09
Gene sequence:
>786_bases ATGAGTAAAGCCTGGCTGATCTCGGGGCCTCCAGGCTGCGGCAAAACAACCTGGATCCTCAACACAATGCAGAGCCACTC CGGGTGTTGTGGATACCTGCGACTTGAGGGTTACGCCGATGAAAGCCTTGAACAGGCCCCCGACACGGGGATAGATCTTG CCTTTCTCCAAGATCAGATTCCTCAACTGAGAGACCTCGCTGATCCTCATCTAGACCTCGCGTCCCAACCGGACGACTTG CTGGCATTGATCGAAGTTCCTCAGTTCCGCCCTCCCAAGGAGAGTGGTCTGATCGGGATCGATCCTCGCGTCAAAGCTCA GCTCGAGGCATTTCAGCTGCTCCCTGATCAGCATCTCCACTTCGGCCAAGACCCTGAATTGCCGAAGCGAGACACCTTGG AATTCAGCAAGCTCGAATCCTGGACCATCAGCCTTCACAAGTATGTCTGGGACCCCAGCAGCCTCAACAGCTTCTGGTTC GAACTTGTGAACGGTGCTTATGGCGATGTTTACCGAGCCAAGGCATTAATGAATCTGCCTGATGGTCGTGCATTTTTCTG CAATTGGATGATGACTCAGGACGGTTCACAGTTCCTGCCCCTGCAAGCAGTTGCACCACCAAATGGCCGCCCCACTCGAG TGTCTGAATTGGTGGTTCAAGGCAAAGCGCTCGATGCAGTCGGCGCTCAGTCGACGATCGACGACTGCCTGCTCAACGAT GCCGTATTGGAGATGCATCAGGCACCTCTGCGGGATCGGCAACCAGAACTCACTCACTCACGCTGA
Upstream 100 bases:
>100_bases CTGGAGACCCAAGGCCCTTTCAGGGCGGTGAGTTGGACCAACTCCAAATGATGACCATGCGAGTTCCACGCAATCAGCCA ACAGCCTTGTTGCTACAACC
Downstream 100 bases:
>100_bases TTGTTATGGCTCATGCTGTGATTTCGTGTCTGCACGCCAACCTCGCTGCATTCGAGGCGGTGCTGGATGACATTGATCAA CAAGGGATCGAGACGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSKAWLISGPPGCGKTTWILNTMQSHSGCCGYLRLEGYADESLEQAPDTGIDLAFLQDQIPQLRDLADPHLDLASQPDDL LALIEVPQFRPPKESGLIGIDPRVKAQLEAFQLLPDQHLHFGQDPELPKRDTLEFSKLESWTISLHKYVWDPSSLNSFWF ELVNGAYGDVYRAKALMNLPDGRAFFCNWMMTQDGSQFLPLQAVAPPNGRPTRVSELVVQGKALDAVGAQSTIDDCLLND AVLEMHQAPLRDRQPELTHSR
Sequences:
>Translated_261_residues MSKAWLISGPPGCGKTTWILNTMQSHSGCCGYLRLEGYADESLEQAPDTGIDLAFLQDQIPQLRDLADPHLDLASQPDDL LALIEVPQFRPPKESGLIGIDPRVKAQLEAFQLLPDQHLHFGQDPELPKRDTLEFSKLESWTISLHKYVWDPSSLNSFWF ELVNGAYGDVYRAKALMNLPDGRAFFCNWMMTQDGSQFLPLQAVAPPNGRPTRVSELVVQGKALDAVGAQSTIDDCLLND AVLEMHQAPLRDRQPELTHSR >Mature_260_residues SKAWLISGPPGCGKTTWILNTMQSHSGCCGYLRLEGYADESLEQAPDTGIDLAFLQDQIPQLRDLADPHLDLASQPDDLL ALIEVPQFRPPKESGLIGIDPRVKAQLEAFQLLPDQHLHFGQDPELPKRDTLEFSKLESWTISLHKYVWDPSSLNSFWFE LVNGAYGDVYRAKALMNLPDGRAFFCNWMMTQDGSQFLPLQAVAPPNGRPTRVSELVVQGKALDAVGAQSTIDDCLLNDA VLEMHQAPLRDRQPELTHSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29134; Mature: 29003
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAWLISGPPGCGKTTWILNTMQSHSGCCGYLRLEGYADESLEQAPDTGIDLAFLQDQI CCCCEEEECCCCCCCHHHEEEHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHH PQLRDLADPHLDLASQPDDLLALIEVPQFRPPKESGLIGIDPRVKAQLEAFQLLPDQHLH HHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCC FGQDPELPKRDTLEFSKLESWTISLHKYVWDPSSLNSFWFELVNGAYGDVYRAKALMNLP CCCCCCCCCCCCCHHHHHHHHEEEEHHEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC DGRAFFCNWMMTQDGSQFLPLQAVAPPNGRPTRVSELVVQGKALDAVGAQSTIDDCLLND CCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHH AVLEMHQAPLRDRQPELTHSR HHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SKAWLISGPPGCGKTTWILNTMQSHSGCCGYLRLEGYADESLEQAPDTGIDLAFLQDQI CCCEEEECCCCCCCHHHEEEHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCHHHHHHHH PQLRDLADPHLDLASQPDDLLALIEVPQFRPPKESGLIGIDPRVKAQLEAFQLLPDQHLH HHHHHHCCCCCCCCCCCHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCCCC FGQDPELPKRDTLEFSKLESWTISLHKYVWDPSSLNSFWFELVNGAYGDVYRAKALMNLP CCCCCCCCCCCCCHHHHHHHHEEEEHHEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCC DGRAFFCNWMMTQDGSQFLPLQAVAPPNGRPTRVSELVVQGKALDAVGAQSTIDDCLLND CCCEEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHH AVLEMHQAPLRDRQPELTHSR HHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA