| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124022774
Identifier: 124022774
GI number: 124022774
Start: 958852
End: 959562
Strand: Reverse
Name: 124022774
Synonym: P9303_10671
Alternate gene names: NA
Gene position: 959562-958852 (Counterclockwise)
Preceding gene: 124022779
Following gene: 124022773
Centisome position: 35.77
GC content: 54.01
Gene sequence:
>711_bases ATGCAGACCCTTGACTGGATCTGGTTGCTACACCCGATTTTCGCCGTAGCCTTGATCTACCCCCTACTGGGGGTAGTCCT AAACCTGTCACTTCAAACCCGCAGTCGTCGGCTAAAACTTCAAAACGAAAGTCCAGCCAATGTCGGGAGTGTGCACAGCA ATCTCGGACGATGGCTCTCAGCCGGAGTGATCGCAATCGTGCTGCTTGCTCTGGTCGTGATGATCAGCACTGAACATCCG CTAACGGAGTTTGAGGGAGGTCTGATCCGTGCTGGATTGCTTCTACTGGTACTCATTGGAAGTTGCATCGCTTTGCTGAC AACCTGGCGAGACAAAAGACCCGCCTATCGAGCAGGCTTCTCCTTACTCTGCTGGGCAGGTGTCATCGTCCTTGGGATGC AGCCGGAAGTATTCCGCCTCGGTGACAACCCCCTCAAAGCAGAATTCTGGCAATCGCATTTCTGGGGTGGCATTGGTCTC GTTGGGCTGATGCTGTTCTCGCTTGCATCCCGACAAGAAATTCTGCGTGATCTGCGCTGGCGATGGCTGCACATCACAGC CAATAGTCTTGCGGCGGTGATCTTCCTGGCAGAAGCAATCACCGGCCCCAAAGCCCTACTAGAGATCCCTCTGAGTTGGC AAAAGCCTTACATCCAACAGGCAAAAGCCGAGCGGGTAGCAAATTACACCGCGAATGCTCCTAAGGCGTAA
Upstream 100 bases:
>100_bases CAGTTCAAATCAATAAGCTCTAAGCGATGGCGTGAAGGCTTTTAGAACCATTGCTAATCCAATGGTGTCTCCCTTTTGAT TCCCCGACCAGACCCTCACC
Downstream 100 bases:
>100_bases GGGTTGTTTTGTTGTACGCGCCCAGGCACCAGTTCTGGAACAAACGTCATGCCGCCAAACAGATCAAAGATGAGCTCTAA GACGTCCTGGTCTTTCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MQTLDWIWLLHPIFAVALIYPLLGVVLNLSLQTRSRRLKLQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPKA
Sequences:
>Translated_236_residues MQTLDWIWLLHPIFAVALIYPLLGVVLNLSLQTRSRRLKLQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPKA >Mature_236_residues MQTLDWIWLLHPIFAVALIYPLLGVVLNLSLQTRSRRLKLQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26235; Mature: 26235
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLDWIWLLHPIFAVALIYPLLGVVLNLSLQTRSRRLKLQNESPANVGSVHSNLGRWLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH AGVIAIVLLALVVMISTEHPLTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGF HHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGLVGLMLFSLASRQEILRDLRW HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPKA HEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTLDWIWLLHPIFAVALIYPLLGVVLNLSLQTRSRRLKLQNESPANVGSVHSNLGRWLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH AGVIAIVLLALVVMISTEHPLTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGF HHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGLVGLMLFSLASRQEILRDLRW HHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPKA HEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA