BacMap

Definition	Prochlorococcus marinus str. MIT 9303, complete genome.
Accession	NC_008820
Length	2,682,675

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The map label for this gene is 124022764

Identifier: 124022764

GI number: 124022764

Start: 954058

End: 954837

Strand: Reverse

Name: 124022764

Synonym: P9303_10571

Alternate gene names: NA

Gene position: 954837-954058 (Counterclockwise)

Preceding gene: 124022769

Following gene: 124022763

Centisome position: 35.59

GC content: 41.79

Gene sequence:

>780_bases
ATGGGATTCCGCCTCAAACTGCATGAACAGGTAATCAATCAATCCACAGGAGGCAATACATCGATATTCAATAAGTTAAG
TGGCGCAACAATTGCTGTTTCAATCTTTTTTGCAGTTCTAAGCACTGAAAATCAAATTGATTTTCAGTTTGGCGGACAAA
TAGATGCAATCGATTGGATCATTGGCTGTCTGTTTTGCATTGAATATTTTTGTCGAGCATGGACTGCCCCACTTGAGGGC
AAATATGGAGAGGGTATAGAAGGCGCGATTCGCTACATGTTCTCACCAATGGCCATTGTTGATCTGATTGCAATCGTCCC
CTCCTTTATCGGTGTAAGAACAGAACTAAAGATCCTTAGAATCATTCGTCTTATTACGATTCTAAAGGTTGGCCGCAGCG
AAAGATTCAAGCAAAGCATGCTACATTTCAACTATGCACTCAGATCCAAGAGCCAAGAGCTGCAGATATCTACTGTTTAT
ACATTATTGCTTTTACTAATTAGCAGCACATTGATGTATCTTGCAGAGTCATCTATTCAGCCTGATCTATTAGGTTCAAT
ACCAAGATGCCTATGGTGGTCAATTAATGCAGTCAGCTCAGTGGGGCATGGAGATTCAGTGCCCATTAGTGCGGTAGGCA
AGATTATCGCTTCAGTAACTTCTCTTATGGGAATTGGAGCCATCGCCATACCTACCGGAATTCTTGCCGCAGGTTTTAGC
GAATCAATTGCTGTGCAAAAGAAGAATCTTGAGGAATCTGCTCAGGAAAGCATTACTTAG

Upstream 100 bases:

>100_bases
CCAGGAAAGCTCCGGACAACTGGCACGCTAAGGCTCGCTTGAGCGACCCGTGCCTAGGATGGATTGAAATCAAAAGGGAG
AGGGAACCTTGGGGACCATC

Downstream 100 bases:

>100_bases
GAATCGACACACGGCAATTTGTTCATAATATCAAACAATCAAATCCTTGTTTTCAGGCAAAAGTTGAAAGATGAGAGTTT
TAGCTGTAGTTGGCTAGATA

Product: potassium channel, VIC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRAWTAPLEG
KYGEGIEGAIRYMFSPMAIVDLIAIVPSFIGVRTELKILRIIRLITILKVGRSERFKQSMLHFNYALRSKSQELQISTVY
TLLLLLISSTLMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAAGFS
ESIAVQKKNLEESAQESIT

Sequences:

>Translated_259_residues
MGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRAWTAPLEG
KYGEGIEGAIRYMFSPMAIVDLIAIVPSFIGVRTELKILRIIRLITILKVGRSERFKQSMLHFNYALRSKSQELQISTVY
TLLLLLISSTLMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAAGFS
ESIAVQKKNLEESAQESIT
>Mature_258_residues
GFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRAWTAPLEGK
YGEGIEGAIRYMFSPMAIVDLIAIVPSFIGVRTELKILRIIRLITILKVGRSERFKQSMLHFNYALRSKSQELQISTVYT
LLLLLISSTLMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAAGFSE
SIAVQKKNLEESAQESIT

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI27436974, Length=245, Percent_Identity=28.5714285714286, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI32479527, Length=265, Percent_Identity=29.811320754717, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI32479525, Length=246, Percent_Identity=31.3008130081301, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI26051262, Length=221, Percent_Identity=25.3393665158371, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI26051260, Length=221, Percent_Identity=25.3393665158371, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI26051264, Length=221, Percent_Identity=25.3393665158371, Blast_Score=94, Evalue=9e-20,
Organism=Homo sapiens, GI27436981, Length=275, Percent_Identity=26.1818181818182, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI26638655, Length=200, Percent_Identity=29, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI27436986, Length=274, Percent_Identity=26.6423357664234, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI4826784, Length=245, Percent_Identity=28.1632653061224, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI27436984, Length=274, Percent_Identity=26.6423357664234, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI26638653, Length=200, Percent_Identity=29, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI26051268, Length=224, Percent_Identity=25.8928571428571, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4504817, Length=206, Percent_Identity=25.2427184466019, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4826782, Length=207, Percent_Identity=26.0869565217391, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI9789987, Length=275, Percent_Identity=26.5454545454545, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI119395748, Length=258, Percent_Identity=24.4186046511628, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI25952092, Length=210, Percent_Identity=23.8095238095238, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4504821, Length=186, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI236462242, Length=200, Percent_Identity=26, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI88758565, Length=202, Percent_Identity=24.7524752475248, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI20070166, Length=209, Percent_Identity=28.2296650717703, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI28373065, Length=200, Percent_Identity=26, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI236461942, Length=200, Percent_Identity=26, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI236461719, Length=200, Percent_Identity=26, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI25952087, Length=196, Percent_Identity=26.0204081632653, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI236462079, Length=200, Percent_Identity=26, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI26051266, Length=222, Percent_Identity=25.2252252252252, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI25952108, Length=210, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI4758630, Length=202, Percent_Identity=28.2178217821782, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI5031819, Length=137, Percent_Identity=26.2773722627737, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI13492973, Length=207, Percent_Identity=26.5700483091787, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI27436996, Length=272, Percent_Identity=26.1029411764706, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI45383011, Length=198, Percent_Identity=26.2626262626263, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI27436988, Length=209, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI24497458, Length=199, Percent_Identity=24.6231155778894, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21217561, Length=199, Percent_Identity=24.6231155778894, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21217563, Length=199, Percent_Identity=24.6231155778894, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI24497460, Length=169, Percent_Identity=25.4437869822485, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4826786, Length=169, Percent_Identity=23.6686390532544, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI7657289, Length=192, Percent_Identity=30.2083333333333, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI163792201, Length=169, Percent_Identity=23.6686390532544, Blast_Score=65, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17544122, Length=262, Percent_Identity=29.0076335877863, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71989369, Length=194, Percent_Identity=30.9278350515464, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71989376, Length=194, Percent_Identity=30.9278350515464, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989381, Length=194, Percent_Identity=30.9278350515464, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989361, Length=194, Percent_Identity=30.9278350515464, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI25147242, Length=189, Percent_Identity=33.8624338624339, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25147238, Length=190, Percent_Identity=33.6842105263158, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71994134, Length=252, Percent_Identity=25, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32564066, Length=250, Percent_Identity=27.2, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193206869, Length=189, Percent_Identity=22.7513227513227, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25148255, Length=192, Percent_Identity=25, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71994313, Length=161, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71986003, Length=210, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71986008, Length=210, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32564076, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564084, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564088, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71985535, Length=217, Percent_Identity=23.963133640553, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI72000220, Length=184, Percent_Identity=25.5434782608696, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71986011, Length=193, Percent_Identity=27.4611398963731, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564090, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564082, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI32564086, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32564080, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17569273, Length=163, Percent_Identity=28.2208588957055, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193207406, Length=226, Percent_Identity=23.0088495575221, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994320, Length=151, Percent_Identity=29.8013245033113, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71986574, Length=161, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI221330117, Length=228, Percent_Identity=29.3859649122807, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI221330119, Length=228, Percent_Identity=29.3859649122807, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281363095, Length=228, Percent_Identity=29.3859649122807, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281363097, Length=227, Percent_Identity=29.5154185022026, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI281365536, Length=238, Percent_Identity=28.9915966386555, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI17737641, Length=202, Percent_Identity=28.2178217821782, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI116007764, Length=238, Percent_Identity=28.9915966386555, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24656294, Length=238, Percent_Identity=28.9915966386555, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI24656289, Length=238, Percent_Identity=28.9915966386555, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI161084970, Length=202, Percent_Identity=28.2178217821782, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24642916, Length=222, Percent_Identity=23.8738738738739, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24642914, Length=222, Percent_Identity=23.8738738738739, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI45555859, Length=222, Percent_Identity=23.8738738738739, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI45549143, Length=222, Percent_Identity=23.8738738738739, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24642910, Length=222, Percent_Identity=23.8738738738739, Blast_Score=84, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 28272; Mature: 28141

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWI
CCCEEHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
IGCLFCIEYFCRAWTAPLEGKYGEGIEGAIRYMFSPMAIVDLIAIVPSFIGVRTELKILR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRLITILKVGRSERFKQSMLHFNYALRSKSQELQISTVYTLLLLLISSTLMYLAESSIQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAAGFS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
ESIAVQKKNLEESAQESIT
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWI
CCEEHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
IGCLFCIEYFCRAWTAPLEGKYGEGIEGAIRYMFSPMAIVDLIAIVPSFIGVRTELKILR
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRLITILKVGRSERFKQSMLHFNYALRSKSQELQISTVYTLLLLLISSTLMYLAESSIQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAAGFS
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
ESIAVQKKNLEESAQESIT
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]