| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022756
Identifier: 124022756
GI number: 124022756
Start: 950019
End: 950750
Strand: Reverse
Name: 124022756
Synonym: P9303_10491
Alternate gene names: NA
Gene position: 950750-950019 (Counterclockwise)
Preceding gene: 124022758
Following gene: 124022754
Centisome position: 35.44
GC content: 40.16
Gene sequence:
>732_bases ATGGCTAATAGGCGATTTTTTTTAGGAGCTGTTTCGTTCTTGGCAACTAGTGCATTTAATTTGCTGCCTGCATTTGCAGG TTCATATCAAGCCCTTTGTGGCGGCAGCAAATGCACTGTCAATGTTAACTCAGAATTTATTAGCTCACCTTACGGATCTA TCCCTGTTTCGCGAGTGACTAGTTGGGGGGGAGGAGGTGACTCGTCTACAAGCGTAGGCACTGGAGTTGCAACTACCATT TTATTTGGTGGTATAGGTCTATTGGGTTTCCTCGCAAAGAACCATGACTATCAGTTCACGATTAATGGTTATGACGTAGA TGGTAGAAAAACTTCTATGCAAATCCAATTTAAAAATAGTAAGCCTGCAAAAAGATTTATGAATGAGATTCCAGTTGTCA CTGGGTTGGGAATGGGGCAGAGGAGAACGGCTGCTGAAATAAGAGCCATAGAGTCTGGCCAAGTTATAGAACCAGGGCCA ATGAATAGAGATAGGTCACTTTATCCTAAAAAAGAAAATAGATGTGCTGTTGTTCTTAGTGAATATGATTGCAATTATGA TCTTTATCTGGAGGCCAATCCATCTATTAAAGTATGGGCAGAGGCAAATCCGGATCTAGCCAAAAAAGAACGAATTCGAC TTAAGGCCATAGATAATAATAAAGACAAAATGCCAAATAAATCTTCCGGAAGTTTTGAGCTTGATCCTGTTAATAAGTAC AAATCGCAATAG
Upstream 100 bases:
>100_bases CACTTCATCATGCAAGGTCAATAGATATTGAATGCAGGGAAATAATGAACTTGACTTTTAACCTATTGAGGCATATAATT ATAAAAATCGAATTCTTATT
Downstream 100 bases:
>100_bases ATTAAATAACAGCAAAGATGTGCTTTTCGCCTTCATAAATATGATTGCATCTATGGTCTTTATATTCAACAAAAGCCTTC ATTAAAGGTTTGGTCTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MANRRFFLGAVSFLATSAFNLLPAFAGSYQALCGGSKCTVNVNSEFISSPYGSIPVSRVTSWGGGGDSSTSVGTGVATTI LFGGIGLLGFLAKNHDYQFTINGYDVDGRKTSMQIQFKNSKPAKRFMNEIPVVTGLGMGQRRTAAEIRAIESGQVIEPGP MNRDRSLYPKKENRCAVVLSEYDCNYDLYLEANPSIKVWAEANPDLAKKERIRLKAIDNNKDKMPNKSSGSFELDPVNKY KSQ
Sequences:
>Translated_243_residues MANRRFFLGAVSFLATSAFNLLPAFAGSYQALCGGSKCTVNVNSEFISSPYGSIPVSRVTSWGGGGDSSTSVGTGVATTI LFGGIGLLGFLAKNHDYQFTINGYDVDGRKTSMQIQFKNSKPAKRFMNEIPVVTGLGMGQRRTAAEIRAIESGQVIEPGP MNRDRSLYPKKENRCAVVLSEYDCNYDLYLEANPSIKVWAEANPDLAKKERIRLKAIDNNKDKMPNKSSGSFELDPVNKY KSQ >Mature_242_residues ANRRFFLGAVSFLATSAFNLLPAFAGSYQALCGGSKCTVNVNSEFISSPYGSIPVSRVTSWGGGGDSSTSVGTGVATTIL FGGIGLLGFLAKNHDYQFTINGYDVDGRKTSMQIQFKNSKPAKRFMNEIPVVTGLGMGQRRTAAEIRAIESGQVIEPGPM NRDRSLYPKKENRCAVVLSEYDCNYDLYLEANPSIKVWAEANPDLAKKERIRLKAIDNNKDKMPNKSSGSFELDPVNKYK SQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26519; Mature: 26388
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRRFFLGAVSFLATSAFNLLPAFAGSYQALCGGSKCTVNVNSEFISSPYGSIPVSRVT CCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECHHHHCCCCCCCCHHHHH SWGGGGDSSTSVGTGVATTILFGGIGLLGFLAKNHDYQFTINGYDVDGRKTSMQIQFKNS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCCCEEEEEEEECCC KPAKRFMNEIPVVTGLGMGQRRTAAEIRAIESGQVIEPGPMNRDRSLYPKKENRCAVVLS CCHHHHHHHCCEEEECCCCCCHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEE EYDCNYDLYLEANPSIKVWAEANPDLAKKERIRLKAIDNNKDKMPNKSSGSFELDPVNKY ECCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCHHH KSQ CCC >Mature Secondary Structure ANRRFFLGAVSFLATSAFNLLPAFAGSYQALCGGSKCTVNVNSEFISSPYGSIPVSRVT CCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECHHHHCCCCCCCCHHHHH SWGGGGDSSTSVGTGVATTILFGGIGLLGFLAKNHDYQFTINGYDVDGRKTSMQIQFKNS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEECCCCEEEEEEEECCC KPAKRFMNEIPVVTGLGMGQRRTAAEIRAIESGQVIEPGPMNRDRSLYPKKENRCAVVLS CCHHHHHHHCCEEEECCCCCCHHHHHHEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEE EYDCNYDLYLEANPSIKVWAEANPDLAKKERIRLKAIDNNKDKMPNKSSGSFELDPVNKY ECCCCEEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCHHH KSQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA