| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022755
Identifier: 124022755
GI number: 124022755
Start: 949174
End: 949695
Strand: Direct
Name: 124022755
Synonym: P9303_10481
Alternate gene names: NA
Gene position: 949174-949695 (Clockwise)
Preceding gene: 124022753
Following gene: 124022757
Centisome position: 35.38
GC content: 40.8
Gene sequence:
>522_bases ATGGGAGGAGGAAGCTCATCAACAAATGTAGGACTTGGTGCAGCCACTACTATTCTTCTTGGACCTGTTGGGCTGTTGGG ATTTTTTGCAAAAAATCATTCTTACGCCTTTACTATCAATGGTTATAATAAAGAAGGTAATAAAGAGACAATATCATTTC GGTTCAAAGATCCTTCTCAACCCCGAAGGTTGATGACAGAACTCCCAATCTTGACAGGCTTAGGGTTAGGACAGTCTAGG AGTGAAGCAGAGATCACGGAACTTGAATCTGATGAAGGGATGCTTGAACCTCAGTCAATTGAACGCTACGAAGGGCAAGT TCTCTATGAGGAAGAAGGTGAAATGCTCTATGAGGGGCAAGATGAAAAGACATTCGATAAAGCTCAGTGTGCTGTGAGTC TAAGAGGATACAACTGTAGCTTTAATGAATATTTAGAAGCTAATCCATCTATTAAAGTATGGGCAGAGGCAAATCCGGAT TTAGCAAACAAAGAGAGAATAAGGCTGCAATCAATTGATTGA
Upstream 100 bases:
>100_bases TAAAAGTAGTAAAAAAAGATGTCGTATGATTATTTCTGTCACAGCTGAAGAGATCAGTACACCAAGCAAGGCTATCCCTA CAACAAGGGTCACAAGCTGG
Downstream 100 bases:
>100_bases CCATCTAAAACTTCAATGGGCAAATAATTGCCTTCACGCACATCACAGTAAACAAAGTTAAGTGCATGATCACTTCTAAC ATTCAATTTGTCAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGGGSSSTNVGLGAATTILLGPVGLLGFFAKNHSYAFTINGYNKEGNKETISFRFKDPSQPRRLMTELPILTGLGLGQSR SEAEITELESDEGMLEPQSIERYEGQVLYEEEGEMLYEGQDEKTFDKAQCAVSLRGYNCSFNEYLEANPSIKVWAEANPD LANKERIRLQSID
Sequences:
>Translated_173_residues MGGGSSSTNVGLGAATTILLGPVGLLGFFAKNHSYAFTINGYNKEGNKETISFRFKDPSQPRRLMTELPILTGLGLGQSR SEAEITELESDEGMLEPQSIERYEGQVLYEEEGEMLYEGQDEKTFDKAQCAVSLRGYNCSFNEYLEANPSIKVWAEANPD LANKERIRLQSID >Mature_172_residues GGGSSSTNVGLGAATTILLGPVGLLGFFAKNHSYAFTINGYNKEGNKETISFRFKDPSQPRRLMTELPILTGLGLGQSRS EAEITELESDEGMLEPQSIERYEGQVLYEEEGEMLYEGQDEKTFDKAQCAVSLRGYNCSFNEYLEANPSIKVWAEANPDL ANKERIRLQSID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19129; Mature: 18997
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGGSSSTNVGLGAATTILLGPVGLLGFFAKNHSYAFTINGYNKEGNKETISFRFKDPSQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCC PRRLMTELPILTGLGLGQSRSEAEITELESDEGMLEPQSIERYEGQVLYEEEGEMLYEGQ HHHHHHHCCHHHCCCCCCCCCCCHHEECCCCCCCCCCHHHHHCCCEEEEECCCCEEEECC DEKTFDKAQCAVSLRGYNCSFNEYLEANPSIKVWAEANPDLANKERIRLQSID CCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECC >Mature Secondary Structure GGGSSSTNVGLGAATTILLGPVGLLGFFAKNHSYAFTINGYNKEGNKETISFRFKDPSQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCC PRRLMTELPILTGLGLGQSRSEAEITELESDEGMLEPQSIERYEGQVLYEEEGEMLYEGQ HHHHHHHCCHHHCCCCCCCCCCCHHEECCCCCCCCCCHHHHHCCCEEEEECCCCEEEECC DEKTFDKAQCAVSLRGYNCSFNEYLEANPSIKVWAEANPDLANKERIRLQSID CCCCCCCEEEEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA