Click here to switch to the map view.

The map label for this gene is recR

Identifier: 124022680

GI number: 124022680

Start: 884374

End: 884943

Strand: Direct

Name: recR

Synonym: P9303_09731

Alternate gene names: 124022680

Gene position: 884374-884943 (Clockwise)

Preceding gene: 124022678

Following gene: 124022681

Centisome position: 32.97

GC content: 53.86

Gene sequence:

>570_bases
TTGATCGACCAGTTCGAGCGTCTGCCTGGGATTGGGCCACGAACGGCCCAGAGACTTGCCCTGCATCTGTTGAGACAACC
GGAAGATCAAATCCGCGCTTTTGCTGAGGCACTCCTCGCGGCCCGTTCTCAAGTGGGTCAATGTCAGACCTGTTTTCATC
TCAGCGCGGAGCCTTTATGCGACATTTGCCGTGATGGCACGCGATGCGATCAATTGCTTTGTGTGGTGGCTGATTCCCGA
GATCTGCTAGCTCTCGAAAGAACCAGGGAATATAAGGGTCGCTATCACGTCCTCGGTGGATTGATTTCACCAATGGATGG
TATCGGGCCGGACATGCTGCAGATCCCCAGCTTGATTCAACGCGTTGATCGAGATGGCATCAGCGAGGTCATTCTCGCTC
TCACTCCCAGTGTTGAAGGTGACACCACTAGTCTTTACCTGGCACGCTTGTTAAAGCCGTTCACCCAAGTGAGTCGAATC
GCCTACGGCCTTCCTGTTGGTAGTGAGTTGGAGTATGCCGACGAAGTCACCCTGACTCGTGCACTTGAAGGCCGTCGAGC
TATGCAATAA

Upstream 100 bases:

>100_bases
TACGGTCTTGGCTTGATCAACAATTGCCACCTGGTGAACTGCCAAGATTCTCAGTATCTGCGGCGGACCCCTGAGCGGCT
TTACTCGACCCCTGGCTCGC

Downstream 100 bases:

>100_bases
AGCAATGTCTTCCACCCATCGTCAGACCCAATACAGCACCATTTTGCCTGCGGAGCGCCTTCCGGAATGGTTGCGTCGCC
CCATTGGCAGCGTCTCCCAG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLCDICRDGTRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ

Sequences:

>Translated_189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLCDICRDGTRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ
>Mature_189_residues
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLCDICRDGTRCDQLLCVVADSR
DLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQRVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRI
AYGLPVGSELEYADEVTLTRALEGRRAMQ

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=184, Percent_Identity=42.3913043478261, Blast_Score=150, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_PROM3 (A2C8B2)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016987.1
- ProteinModelPortal:   A2C8B2
- SMR:   A2C8B2
- STRING:   A2C8B2
- GeneID:   4778745
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_09731
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 20979; Mature: 20979

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLC
CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
DICRDGTRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
RVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRIAYGLPVGSELEYADEVTLTR
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRAMQ
HHHHHHCCC
>Mature Secondary Structure
MIDQFERLPGIGPRTAQRLALHLLRQPEDQIRAFAEALLAARSQVGQCQTCFHLSAEPLC
CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHH
DICRDGTRCDQLLCVVADSRDLLALERTREYKGRYHVLGGLISPMDGIGPDMLQIPSLIQ
HHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHH
RVDRDGISEVILALTPSVEGDTTSLYLARLLKPFTQVSRIAYGLPVGSELEYADEVTLTR
HHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ALEGRRAMQ
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA