| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is srmB [H]
Identifier: 124022674
GI number: 124022674
Start: 877054
End: 878964
Strand: Direct
Name: srmB [H]
Synonym: P9303_09651
Alternate gene names: 124022674
Gene position: 877054-878964 (Clockwise)
Preceding gene: 124022673
Following gene: 124022675
Centisome position: 32.69
GC content: 53.22
Gene sequence:
>1911_bases ATGGGGCGTTGTCTGCCTGATTTAAAGGATCAATCAGGCAGACAACGCCTTTTCTCGATGACCCATACAAAATCGCACGA GGATGTCTCGTGTTCCCCTGAGAAGAGTGCGCCTGAGATCTCTTCAACGAGCTCGGATGATGGTTTAACCACTGTGGCTG AGGCCACCAATCAAAACAATTCAGACGATGGCTCGGTCGCTGTAGCCGCTGAGGCCTGTGAAGATATTGAAGCGACAGAG TTAGTTTCCGAATTCGATTGTTTTGGCTTTAGCGAGCCGTTGCTCAAAACCCTTGCAGAAAAGGGTTATAAGCAACCCTC TCCAATTCAGAAAGCTGCTATTCCAGAATTGATGCTGGGTCGTGATCTAGTTGGTCAGGCTCAGACTGGAACAGGCAAAA CAGCAGCTTTTGCGTTGCCCCTGATCGAGCGGCTTCAGGATCATGGCAGTCGTCCCCAAGTGTTGGTGCTGGCCCCGACC CGGGAGTTGGCGATGCAGGTCGCGGATTCGTTCCGTGCTTATGCCGTTGGCCATCCGCATCTCAAAGTTTTGGCGGTTTA TGGCGGAGCCGATTTCCGCTCTCAGATCAATACGCTGAAGCGTGGAGTGGATGTTGTGGTAGGTACCCCGGGCCGCTTGA TGGATCACATGCGGCAGGGCACTCTCGACACCTCTGGTTTGAGGTGTTTGGTGCTTGACGAAGCCGATGAAATGCTGCGT ATGGGCTTCATCGATGATGTCGAATGGATCCTGGAGCAGTTGCCTAAAGAACGTCAGATGGTGCTGTTTTCGGCAACGAT GCCATCAGAGATCCGTCGACTTTCGAAGCGTTACCTACACGAACCAGCAGAGATCACGATCAAGAGCCGTGATCAGGAGG CTCGTCTCATCCGTCAGCGATGCATCACTCTCCAGAACAGCCACAAACTTGAAGCCCTTAGAAGGGTTCTTGAGGCTTTC ACTGGTGAGGGAGTGATTATTTTTGCCCGCACCAAGGTGATCACTCTCACAGTTGCTGAGGCACTGGAATCCGCTGGACA CGATGTTGCCGTACTGAATGGGGATGTCCCTCAGAACCAACGGGAACGAACGGTTGAACGTTTGCGCAAAGGCAGCGTGA ATATCTTGGTTGCTACTGATGTTGCCGCTCGCGGCCTAGATGTCGATCGCATCAGCCTGGTGATCAACTACGACATCCCC TTTGATAGCGAAGCCTATGTGCATCGCATCGGGCGTACCGGCCGGGCTGGCCGCAGTGGAGAGGCCATTTTGTTCGTGAA TCCTAGGGAACGTCGCTTTGTGGGCGGCTTTGAACGTGCTGTAGGTCAACCCATCGAACCGATGGATATCCCCAATAATG CAGCGATTAACCAGAGTCGTCTTGATCGCCTTCGTCAACGCCTCACCACTGCCGCTAAGACGGAGAGAGATAACTCTGAG GAGACAGCCCTTCTCCAGGAGCTAATCCAGCGTGTTGTTGAGGAGCTCAGCCTCAGTCCAGAGCAATTGGCTGTAGCAGC ATTAGAGCTTGCTGTTGGCCCAGGCCCAATCTTGGTGCAGGCTGATGAGGGCTGGTTGCAGCAATCAACTCAGCGCAGCC GCCGCAACGATCGTCACGAAATTAGTCGTGGAGGCTCTGGCCGAAGACCTGAGCGTTCATCGAGACCGCCGGAAGATCAC ATGGAGCGCTTTCGTGTGGAAGTCGGTCACCGCGATCGTGTCAAGCCTGGCAATCTGGTTGGTGCCATCGCCAATGAATC CGGGCTTGAAGGACGGATGATTGGTCGCATCCAGATTTTTGAGTCGCACAGTCTTGTGGATCTTCCCAAAGGAATGCCTG AGGATGTTTTTAAAGATCTAAAACGTCTCAAGGTGATGAATCGAGAGTTGCATATCCAGCGCGCTTCTTAA
Upstream 100 bases:
>100_bases ATCAGATATTGAACGCCTCGAGGATGACTACGGACGGGTGATAAGTTAGGCAATCAACCTTTGAAGAAAAGGCGAGGCAG CACAACGCGGGTATCCGCGT
Downstream 100 bases:
>100_bases TTCAGCGTCGATGGTTCTTTTGCAGCGAATCTGCCTATCCATCAGTCTGAGCAGTGTCCTTTTTGGTATGTCTACGGTTG ATGGTCTAGCTCAAAGCAGC
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 636; Mature: 635
Protein sequence:
>636_residues MGRCLPDLKDQSGRQRLFSMTHTKSHEDVSCSPEKSAPEISSTSSDDGLTTVAEATNQNNSDDGSVAVAAEACEDIEATE LVSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLGRDLVGQAQTGTGKTAAFALPLIERLQDHGSRPQVLVLAPT RELAMQVADSFRAYAVGHPHLKVLAVYGGADFRSQINTLKRGVDVVVGTPGRLMDHMRQGTLDTSGLRCLVLDEADEMLR MGFIDDVEWILEQLPKERQMVLFSATMPSEIRRLSKRYLHEPAEITIKSRDQEARLIRQRCITLQNSHKLEALRRVLEAF TGEGVIIFARTKVITLTVAEALESAGHDVAVLNGDVPQNQRERTVERLRKGSVNILVATDVAARGLDVDRISLVINYDIP FDSEAYVHRIGRTGRAGRSGEAILFVNPRERRFVGGFERAVGQPIEPMDIPNNAAINQSRLDRLRQRLTTAAKTERDNSE ETALLQELIQRVVEELSLSPEQLAVAALELAVGPGPILVQADEGWLQQSTQRSRRNDRHEISRGGSGRRPERSSRPPEDH MERFRVEVGHRDRVKPGNLVGAIANESGLEGRMIGRIQIFESHSLVDLPKGMPEDVFKDLKRLKVMNRELHIQRAS
Sequences:
>Translated_636_residues MGRCLPDLKDQSGRQRLFSMTHTKSHEDVSCSPEKSAPEISSTSSDDGLTTVAEATNQNNSDDGSVAVAAEACEDIEATE LVSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLGRDLVGQAQTGTGKTAAFALPLIERLQDHGSRPQVLVLAPT RELAMQVADSFRAYAVGHPHLKVLAVYGGADFRSQINTLKRGVDVVVGTPGRLMDHMRQGTLDTSGLRCLVLDEADEMLR MGFIDDVEWILEQLPKERQMVLFSATMPSEIRRLSKRYLHEPAEITIKSRDQEARLIRQRCITLQNSHKLEALRRVLEAF TGEGVIIFARTKVITLTVAEALESAGHDVAVLNGDVPQNQRERTVERLRKGSVNILVATDVAARGLDVDRISLVINYDIP FDSEAYVHRIGRTGRAGRSGEAILFVNPRERRFVGGFERAVGQPIEPMDIPNNAAINQSRLDRLRQRLTTAAKTERDNSE ETALLQELIQRVVEELSLSPEQLAVAALELAVGPGPILVQADEGWLQQSTQRSRRNDRHEISRGGSGRRPERSSRPPEDH MERFRVEVGHRDRVKPGNLVGAIANESGLEGRMIGRIQIFESHSLVDLPKGMPEDVFKDLKRLKVMNRELHIQRAS >Mature_635_residues GRCLPDLKDQSGRQRLFSMTHTKSHEDVSCSPEKSAPEISSTSSDDGLTTVAEATNQNNSDDGSVAVAAEACEDIEATEL VSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLGRDLVGQAQTGTGKTAAFALPLIERLQDHGSRPQVLVLAPTR ELAMQVADSFRAYAVGHPHLKVLAVYGGADFRSQINTLKRGVDVVVGTPGRLMDHMRQGTLDTSGLRCLVLDEADEMLRM GFIDDVEWILEQLPKERQMVLFSATMPSEIRRLSKRYLHEPAEITIKSRDQEARLIRQRCITLQNSHKLEALRRVLEAFT GEGVIIFARTKVITLTVAEALESAGHDVAVLNGDVPQNQRERTVERLRKGSVNILVATDVAARGLDVDRISLVINYDIPF DSEAYVHRIGRTGRAGRSGEAILFVNPRERRFVGGFERAVGQPIEPMDIPNNAAINQSRLDRLRQRLTTAAKTERDNSEE TALLQELIQRVVEELSLSPEQLAVAALELAVGPGPILVQADEGWLQQSTQRSRRNDRHEISRGGSGRRPERSSRPPEDHM ERFRVEVGHRDRVKPGNLVGAIANESGLEGRMIGRIQIFESHSLVDLPKGMPEDVFKDLKRLKVMNRELHIQRAS
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=398, Percent_Identity=40.4522613065327, Blast_Score=270, Evalue=3e-72, Organism=Homo sapiens, GI7661920, Length=389, Percent_Identity=37.2750642673522, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI50659095, Length=414, Percent_Identity=37.9227053140097, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI41327771, Length=370, Percent_Identity=38.6486486486486, Blast_Score=249, Evalue=7e-66, Organism=Homo sapiens, GI45446747, Length=364, Percent_Identity=37.0879120879121, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI45446743, Length=364, Percent_Identity=37.0879120879121, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI224593278, Length=512, Percent_Identity=34.375, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=35.7142857142857, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=39.0173410404624, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI188035877, Length=368, Percent_Identity=34.7826086956522, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=37.9120879120879, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI38201710, Length=408, Percent_Identity=36.5196078431373, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI148613856, Length=356, Percent_Identity=38.4831460674157, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI301171467, Length=397, Percent_Identity=37.5314861460957, Blast_Score=232, Evalue=1e-60, Organism=Homo sapiens, GI301171475, Length=397, Percent_Identity=37.5314861460957, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI87196351, Length=397, Percent_Identity=37.5314861460957, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI83700235, Length=381, Percent_Identity=37.5328083989501, Blast_Score=229, Evalue=5e-60, Organism=Homo sapiens, GI4503529, Length=399, Percent_Identity=36.5914786967419, Blast_Score=229, Evalue=7e-60, Organism=Homo sapiens, GI169881239, Length=396, Percent_Identity=36.6161616161616, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI13514809, Length=396, Percent_Identity=36.6161616161616, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI164664518, Length=377, Percent_Identity=33.6870026525199, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=36.4902506963788, Blast_Score=225, Evalue=1e-58, Organism=Homo sapiens, GI4758138, Length=348, Percent_Identity=37.6436781609195, Blast_Score=222, Evalue=8e-58, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=35.1851851851852, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI55749865, Length=381, Percent_Identity=33.3333333333333, Blast_Score=217, Evalue=3e-56, Organism=Homo sapiens, GI262118318, Length=352, Percent_Identity=34.9431818181818, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI216548263, Length=350, Percent_Identity=35.1428571428571, Blast_Score=215, Evalue=9e-56, Organism=Homo sapiens, GI13518015, Length=350, Percent_Identity=35.1428571428571, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI262231852, Length=350, Percent_Identity=35.1428571428571, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=32.4786324786325, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=32.4786324786325, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI21040371, Length=389, Percent_Identity=31.8766066838046, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI8922886, Length=361, Percent_Identity=35.4570637119114, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI6005743, Length=361, Percent_Identity=35.4570637119114, Blast_Score=209, Evalue=7e-54, Organism=Homo sapiens, GI62241022, Length=344, Percent_Identity=35.7558139534884, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI51094101, Length=489, Percent_Identity=29.6523517382413, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI164419743, Length=489, Percent_Identity=29.6523517382413, Blast_Score=200, Evalue=4e-51, Organism=Homo sapiens, GI256223453, Length=354, Percent_Identity=31.0734463276836, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI62241024, Length=334, Percent_Identity=35.6287425149701, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI13514831, Length=379, Percent_Identity=32.9815303430079, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI38327634, Length=395, Percent_Identity=32.4050632911392, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI164419732, Length=338, Percent_Identity=34.6153846153846, Blast_Score=192, Evalue=1e-48, Organism=Homo sapiens, GI41327779, Length=383, Percent_Identity=32.3759791122715, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=31.7460317460317, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38569505, Length=375, Percent_Identity=30.1333333333333, Blast_Score=176, Evalue=8e-44, Organism=Homo sapiens, GI38569503, Length=375, Percent_Identity=30.1333333333333, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI17505907, Length=387, Percent_Identity=30.749354005168, Blast_Score=173, Evalue=4e-43, Organism=Homo sapiens, GI9506931, Length=541, Percent_Identity=27.5415896487985, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=32.3442136498516, Blast_Score=160, Evalue=5e-39, Organism=Homo sapiens, GI256773275, Length=438, Percent_Identity=29.6803652968037, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=29.2270531400966, Blast_Score=133, Evalue=6e-31, Organism=Homo sapiens, GI20336298, Length=196, Percent_Identity=38.7755102040816, Blast_Score=129, Evalue=1e-29, Organism=Homo sapiens, GI9966805, Length=355, Percent_Identity=29.2957746478873, Blast_Score=125, Evalue=9e-29, Organism=Escherichia coli, GI87082221, Length=559, Percent_Identity=47.0483005366726, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1787016, Length=373, Percent_Identity=41.5549597855228, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1787605, Length=336, Percent_Identity=42.5595238095238, Blast_Score=262, Evalue=4e-71, Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=39.3162393162393, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=38.8732394366197, Blast_Score=235, Evalue=8e-63, Organism=Escherichia coli, GI48994977, Length=348, Percent_Identity=25.2873563218391, Blast_Score=73, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71987143, Length=394, Percent_Identity=37.5634517766497, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI17555296, Length=370, Percent_Identity=37.5675675675676, Blast_Score=258, Evalue=6e-69, Organism=Caenorhabditis elegans, GI71995724, Length=402, Percent_Identity=36.0696517412935, Blast_Score=257, Evalue=2e-68, Organism=Caenorhabditis elegans, GI17507121, Length=389, Percent_Identity=35.9897172236504, Blast_Score=253, Evalue=3e-67, Organism=Caenorhabditis elegans, GI32565321, Length=376, Percent_Identity=38.8297872340425, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI71995718, Length=387, Percent_Identity=38.7596899224806, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI86570094, Length=378, Percent_Identity=38.0952380952381, Blast_Score=238, Evalue=6e-63, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=34.3324250681199, Blast_Score=235, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510309, Length=371, Percent_Identity=38.544474393531, Blast_Score=235, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510307, Length=371, Percent_Identity=38.544474393531, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17510559, Length=553, Percent_Identity=31.8264014466546, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI71995514, Length=371, Percent_Identity=38.544474393531, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=38.3977900552486, Blast_Score=231, Evalue=9e-61, Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=40, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17537549, Length=368, Percent_Identity=35.5978260869565, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17507945, Length=374, Percent_Identity=37.1657754010695, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.5779036827195, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=32.4538258575198, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507877, Length=365, Percent_Identity=34.7945205479452, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=33.4210526315789, Blast_Score=205, Evalue=8e-53, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=32.4538258575198, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI17507879, Length=364, Percent_Identity=33.7912087912088, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI193206561, Length=355, Percent_Identity=33.5211267605634, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71999646, Length=360, Percent_Identity=31.6666666666667, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI71999644, Length=360, Percent_Identity=31.6666666666667, Blast_Score=197, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=32.171581769437, Blast_Score=194, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=32.3529411764706, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536101, Length=362, Percent_Identity=32.8729281767956, Blast_Score=183, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17536103, Length=364, Percent_Identity=33.2417582417582, Blast_Score=182, Evalue=6e-46, Organism=Caenorhabditis elegans, GI17508543, Length=393, Percent_Identity=29.5165394402036, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=32.5714285714286, Blast_Score=176, Evalue=3e-44, Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=32.7225130890052, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=31.2849162011173, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI17507641, Length=423, Percent_Identity=28.6052009456265, Blast_Score=158, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=31.4763231197772, Blast_Score=154, Evalue=2e-37, Organism=Caenorhabditis elegans, GI32564046, Length=401, Percent_Identity=28.927680798005, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI25148203, Length=481, Percent_Identity=25.7796257796258, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17556951, Length=396, Percent_Identity=26.7676767676768, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148291, Length=362, Percent_Identity=29.2817679558011, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=26.8292682926829, Blast_Score=128, Evalue=1e-29, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=33.4975369458128, Blast_Score=127, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148205, Length=408, Percent_Identity=24.7549019607843, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71987152, Length=100, Percent_Identity=46, Blast_Score=95, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6321856, Length=390, Percent_Identity=36.9230769230769, Blast_Score=244, Evalue=3e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=367, Percent_Identity=38.4196185286104, Blast_Score=243, Evalue=7e-65, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=39.1549295774648, Blast_Score=241, Evalue=3e-64, Organism=Saccharomyces cerevisiae, GI6324778, Length=404, Percent_Identity=34.6534653465347, Blast_Score=240, Evalue=4e-64, Organism=Saccharomyces cerevisiae, GI6321360, Length=393, Percent_Identity=37.1501272264631, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=377, Percent_Identity=34.2175066312997, Blast_Score=237, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=36.6754617414248, Blast_Score=232, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=33.6088154269972, Blast_Score=226, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6322912, Length=407, Percent_Identity=35.1351351351351, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6322323, Length=407, Percent_Identity=35.1351351351351, Blast_Score=223, Evalue=5e-59, Organism=Saccharomyces cerevisiae, GI6320173, Length=418, Percent_Identity=33.2535885167464, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6324620, Length=427, Percent_Identity=33.0210772833724, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6321963, Length=411, Percent_Identity=33.0900243309002, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=436, Percent_Identity=31.4220183486239, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=32.6760563380282, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=31.9148936170213, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=353, Percent_Identity=33.9943342776204, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6321111, Length=394, Percent_Identity=31.9796954314721, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=378, Percent_Identity=30.6878306878307, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6321267, Length=429, Percent_Identity=32.4009324009324, Blast_Score=173, Evalue=7e-44, Organism=Saccharomyces cerevisiae, GI6320400, Length=367, Percent_Identity=29.9727520435967, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=427, Percent_Identity=28.3372365339578, Blast_Score=153, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=428, Percent_Identity=28.7383177570093, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=452, Percent_Identity=27.6548672566372, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6324366, Length=378, Percent_Identity=25.3968253968254, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6321374, Length=426, Percent_Identity=22.3004694835681, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24645031, Length=389, Percent_Identity=35.9897172236504, Blast_Score=252, Evalue=5e-67, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=37.8453038674033, Blast_Score=251, Evalue=2e-66, Organism=Drosophila melanogaster, GI24662330, Length=365, Percent_Identity=38.0821917808219, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24585582, Length=387, Percent_Identity=35.4005167958656, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=39.0804597701149, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI18857967, Length=352, Percent_Identity=38.6363636363636, Blast_Score=244, Evalue=2e-64, Organism=Drosophila melanogaster, GI21355075, Length=348, Percent_Identity=39.367816091954, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=40.5714285714286, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=37.7952755905512, Blast_Score=242, Evalue=5e-64, Organism=Drosophila melanogaster, GI21356161, Length=490, Percent_Identity=32.6530612244898, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI24582080, Length=397, Percent_Identity=36.272040302267, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24582078, Length=397, Percent_Identity=36.272040302267, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI17136248, Length=397, Percent_Identity=36.272040302267, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24582075, Length=397, Percent_Identity=36.272040302267, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI17985987, Length=401, Percent_Identity=36.4089775561097, Blast_Score=230, Evalue=3e-60, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=36.8421052631579, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=36.8421052631579, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=36.8421052631579, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=34.1397849462366, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=34.1397849462366, Blast_Score=226, Evalue=5e-59, Organism=Drosophila melanogaster, GI17977678, Length=359, Percent_Identity=36.7688022284123, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI17136814, Length=380, Percent_Identity=35.5263157894737, Blast_Score=206, Evalue=4e-53, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=32.6704545454545, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=32.6704545454545, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=32.6704545454545, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI28571808, Length=414, Percent_Identity=32.6086956521739, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28571809, Length=414, Percent_Identity=32.6086956521739, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI28575014, Length=465, Percent_Identity=29.0322580645161, Blast_Score=193, Evalue=4e-49, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=37.8980891719745, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI17647335, Length=374, Percent_Identity=33.4224598930481, Blast_Score=189, Evalue=5e-48, Organism=Drosophila melanogaster, GI21355559, Length=376, Percent_Identity=35.6382978723404, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24642822, Length=386, Percent_Identity=29.7927461139896, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=31.2807881773399, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI24666101, Length=343, Percent_Identity=33.2361516034985, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24668515, Length=362, Percent_Identity=29.2817679558011, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI19920478, Length=351, Percent_Identity=30.1994301994302, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI20130173, Length=334, Percent_Identity=30.5389221556886, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI28571338, Length=234, Percent_Identity=32.0512820512821, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859659, Length=234, Percent_Identity=32.0512820512821, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI24640164, Length=393, Percent_Identity=27.9898218829517, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI17136666, Length=460, Percent_Identity=23.695652173913, Blast_Score=113, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 70613; Mature: 70482
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRCLPDLKDQSGRQRLFSMTHTKSHEDVSCSPEKSAPEISSTSSDDGLTTVAEATNQNN CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC SDDGSVAVAAEACEDIEATELVSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLG CCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCHHHHHC RDLVGQAQTGTGKTAAFALPLIERLQDHGSRPQVLVLAPTRELAMQVADSFRAYAVGHPH CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHEECCCCC LKVLAVYGGADFRSQINTLKRGVDVVVGTPGRLMDHMRQGTLDTSGLRCLVLDEADEMLR EEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHH MGFIDDVEWILEQLPKERQMVLFSATMPSEIRRLSKRYLHEPAEITIKSRDQEARLIRQR HCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH CITLQNSHKLEALRRVLEAFTGEGVIIFARTKVITLTVAEALESAGHDVAVLNGDVPQNQ HHHCCCCHHHHHHHHHHHHHCCCCEEEEEECEEEEEEHHHHHHHCCCCEEEEECCCCCCH RERTVERLRKGSVNILVATDVAARGLDVDRISLVINYDIPFDSEAYVHRIGRTGRAGRSG HHHHHHHHHCCCCEEEEEECHHHCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC EAILFVNPRERRFVGGFERAVGQPIEPMDIPNNAAINQSRLDRLRQRLTTAAKTERDNSE CEEEEECCCCCHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH ETALLQELIQRVVEELSLSPEQLAVAALELAVGPGPILVQADEGWLQQSTQRSRRNDRHE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHH ISRGGSGRRPERSSRPPEDHMERFRVEVGHRDRVKPGNLVGAIANESGLEGRMIGRIQIF HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEE ESHSLVDLPKGMPEDVFKDLKRLKVMNRELHIQRAS CCCCCEECCCCCCHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure GRCLPDLKDQSGRQRLFSMTHTKSHEDVSCSPEKSAPEISSTSSDDGLTTVAEATNQNN CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC SDDGSVAVAAEACEDIEATELVSEFDCFGFSEPLLKTLAEKGYKQPSPIQKAAIPELMLG CCCCCEEEEHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCHHHHHC RDLVGQAQTGTGKTAAFALPLIERLQDHGSRPQVLVLAPTRELAMQVADSFRAYAVGHPH CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHEECCCCC LKVLAVYGGADFRSQINTLKRGVDVVVGTPGRLMDHMRQGTLDTSGLRCLVLDEADEMLR EEEEEEECCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCHHHHHH MGFIDDVEWILEQLPKERQMVLFSATMPSEIRRLSKRYLHEPAEITIKSRDQEARLIRQR HCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH CITLQNSHKLEALRRVLEAFTGEGVIIFARTKVITLTVAEALESAGHDVAVLNGDVPQNQ HHHCCCCHHHHHHHHHHHHHCCCCEEEEEECEEEEEEHHHHHHHCCCCEEEEECCCCCCH RERTVERLRKGSVNILVATDVAARGLDVDRISLVINYDIPFDSEAYVHRIGRTGRAGRSG HHHHHHHHHCCCCEEEEEECHHHCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCCC EAILFVNPRERRFVGGFERAVGQPIEPMDIPNNAAINQSRLDRLRQRLTTAAKTERDNSE CEEEEECCCCCHHHCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH ETALLQELIQRVVEELSLSPEQLAVAALELAVGPGPILVQADEGWLQQSTQRSRRNDRHE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCHHHH ISRGGSGRRPERSSRPPEDHMERFRVEVGHRDRVKPGNLVGAIANESGLEGRMIGRIQIF HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEE ESHSLVDLPKGMPEDVFKDLKRLKVMNRELHIQRAS CCCCCEECCCCCCHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]