| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022670
Identifier: 124022670
GI number: 124022670
Start: 869403
End: 870623
Strand: Direct
Name: 124022670
Synonym: P9303_09611
Alternate gene names: NA
Gene position: 869403-870623 (Clockwise)
Preceding gene: 124022669
Following gene: 124022671
Centisome position: 32.41
GC content: 46.85
Gene sequence:
>1221_bases TTGATACAAAAAACTGAAAATAATCTTAGCCCCTTCAACATTATGGTCATTGCAGGTAGCTGTGCTACTGCAATCGGGCT TGGCATAGGCCGCTTTGATTTTGGGGCAGTTGGACGCTTCATGATCGATGATGCTTGGATCAGTACCACAGGAATGGGAG ATCTTGCAGGCTTAAATCTTGGTGCTTATTTATTGGGCTCTTTGCACCATTCGCAGATACGCAATCGAAAAGTTGTTCTG CGTATGATGATACTTGCATTATTGCTGCTGCCCCTGTCTTTCTGGCTGGAGGCATTTGAATCGAGTTTTTTGTGGCAAGC AGTTGCTCGAATTTGTGCAGGCTTTGCAGCAGGCCATTTGATTAGTGGAATTCCAGCGATTGCTCTTGCTGGTTTGCATT CGCGTCATCGACGCCGAGGTTCAGGTTTGGTTCTGGCTGGAGGAGGGATTGGAGCATTGCTTGGTGCCTCTGCAATTGGC CTCTTTGCCCATCATTCGGCGATGATCGCCTGGGTCATTTTGGCCTTGTTGTCGATGGCATTGGCATTGCCTGTGCTTTG GTTGCTTAGCAAGTCAATACAGTCTCAATCTGCTCCTGAACAATCTCAGGCTGAAGAGAGCTCAACTGACTTAAGTGCAA TAAAACCAGGCAATCGTTGGCGAGTTGTGGTTCTGTTAGTAGGTGGGGGGCTGTTAGTAGGAGCGGGGCAAGTGCCGATT TCACTTTATGCACCGATCGTTGTTGCTCAGAAATTTGGTGAAGCCTCTTCTTTGAGCAGCGACTCTTTAGCTGTACTTGG ATTGGGATCTACGGTTGGGGCACTCACTGCAGCCTTTTTACCGCGCCGATGGCCGACATCCTTGATGCTCCCATTGGTGT CTTGTATTGGACTTCTCGCCAGCGTGTTGTTTTTCTTTAGCGATGAAGTCTCAATCATCCTTTTAGCAACGTTTTTGATT GGTGTATGGATGTGGATGACGGCCACTCTTAGTTATGACAGGCTTGGAGAGTTTTTGCCATCTGCTGAGGCTCATCGACG CGTGTGGGCCGTTATGGTTTCTTTGGTAGGTTTCGGTTATGCATGCTTTTCTTTCTCATTCGCTCATCTAGCAAGTGCCA ACCTTGATTTAGTTCTTTTAATAGGAATTGGAGTTCTAGTAGTTCAGTTGAGCATGGAACTATTGCAAAGATTAGCTTCT TCAAAAGCCCCTAGTTATTGA
Upstream 100 bases:
>100_bases TGTTAAGCTTTTTTGCCCTTGGTGTTCTTGGCTGCAAAAGTAACTTGAATGGGGGCTGGGCAATGCTCACGAGATTCCCG CCAACTTTTACGGAGTTATT
Downstream 100 bases:
>100_bases GGTCTCTGTTACGGCTTGGCTAGATTTGATGAGATTATATGCCTGAGATGCACGTGGAGAGATCAATTCTATTGATGCTT CATTGAAATGCTTAGAGAGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Permease
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MIQKTENNLSPFNIMVIAGSCATAIGLGIGRFDFGAVGRFMIDDAWISTTGMGDLAGLNLGAYLLGSLHHSQIRNRKVVL RMMILALLLLPLSFWLEAFESSFLWQAVARICAGFAAGHLISGIPAIALAGLHSRHRRRGSGLVLAGGGIGALLGASAIG LFAHHSAMIAWVILALLSMALALPVLWLLSKSIQSQSAPEQSQAEESSTDLSAIKPGNRWRVVVLLVGGGLLVGAGQVPI SLYAPIVVAQKFGEASSLSSDSLAVLGLGSTVGALTAAFLPRRWPTSLMLPLVSCIGLLASVLFFFSDEVSIILLATFLI GVWMWMTATLSYDRLGEFLPSAEAHRRVWAVMVSLVGFGYACFSFSFAHLASANLDLVLLIGIGVLVVQLSMELLQRLAS SKAPSY
Sequences:
>Translated_406_residues MIQKTENNLSPFNIMVIAGSCATAIGLGIGRFDFGAVGRFMIDDAWISTTGMGDLAGLNLGAYLLGSLHHSQIRNRKVVL RMMILALLLLPLSFWLEAFESSFLWQAVARICAGFAAGHLISGIPAIALAGLHSRHRRRGSGLVLAGGGIGALLGASAIG LFAHHSAMIAWVILALLSMALALPVLWLLSKSIQSQSAPEQSQAEESSTDLSAIKPGNRWRVVVLLVGGGLLVGAGQVPI SLYAPIVVAQKFGEASSLSSDSLAVLGLGSTVGALTAAFLPRRWPTSLMLPLVSCIGLLASVLFFFSDEVSIILLATFLI GVWMWMTATLSYDRLGEFLPSAEAHRRVWAVMVSLVGFGYACFSFSFAHLASANLDLVLLIGIGVLVVQLSMELLQRLAS SKAPSY >Mature_406_residues MIQKTENNLSPFNIMVIAGSCATAIGLGIGRFDFGAVGRFMIDDAWISTTGMGDLAGLNLGAYLLGSLHHSQIRNRKVVL RMMILALLLLPLSFWLEAFESSFLWQAVARICAGFAAGHLISGIPAIALAGLHSRHRRRGSGLVLAGGGIGALLGASAIG LFAHHSAMIAWVILALLSMALALPVLWLLSKSIQSQSAPEQSQAEESSTDLSAIKPGNRWRVVVLLVGGGLLVGAGQVPI SLYAPIVVAQKFGEASSLSSDSLAVLGLGSTVGALTAAFLPRRWPTSLMLPLVSCIGLLASVLFFFSDEVSIILLATFLI GVWMWMTATLSYDRLGEFLPSAEAHRRVWAVMVSLVGFGYACFSFSFAHLASANLDLVLLIGIGVLVVQLSMELLQRLAS SKAPSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43003; Mature: 43003
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKTENNLSPFNIMVIAGSCATAIGLGIGRFDFGAVGRFMIDDAWISTTGMGDLAGLNL CCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GAYLLGSLHHSQIRNRKVVLRMMILALLLLPLSFWLEAFESSFLWQAVARICAGFAAGHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISGIPAIALAGLHSRHRRRGSGLVLAGGGIGALLGASAIGLFAHHSAMIAWVILALLSMA HHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALPVLWLLSKSIQSQSAPEQSQAEESSTDLSAIKPGNRWRVVVLLVGGGLLVGAGQVPI HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHCCCCCCEEEEEEEECCCEEEECCCCCH SLYAPIVVAQKFGEASSLSSDSLAVLGLGSTVGALTAAFLPRRWPTSLMLPLVSCIGLLA HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SVLFFFSDEVSIILLATFLIGVWMWMTATLSYDRLGEFLPSAEAHRRVWAVMVSLVGFGY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ACFSFSFAHLASANLDLVLLIGIGVLVVQLSMELLQRLASSKAPSY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIQKTENNLSPFNIMVIAGSCATAIGLGIGRFDFGAVGRFMIDDAWISTTGMGDLAGLNL CCCCCCCCCCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GAYLLGSLHHSQIRNRKVVLRMMILALLLLPLSFWLEAFESSFLWQAVARICAGFAAGHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISGIPAIALAGLHSRHRRRGSGLVLAGGGIGALLGASAIGLFAHHSAMIAWVILALLSMA HHCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALPVLWLLSKSIQSQSAPEQSQAEESSTDLSAIKPGNRWRVVVLLVGGGLLVGAGQVPI HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHCCCCCCEEEEEEEECCCEEEECCCCCH SLYAPIVVAQKFGEASSLSSDSLAVLGLGSTVGALTAAFLPRRWPTSLMLPLVSCIGLLA HHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SVLFFFSDEVSIILLATFLIGVWMWMTATLSYDRLGEFLPSAEAHRRVWAVMVSLVGFGY HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ACFSFSFAHLASANLDLVLLIGIGVLVVQLSMELLQRLASSKAPSY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA