Click here to switch to the map view.

The map label for this gene is ydhD [C]

Identifier: 124022661

GI number: 124022661

Start: 861061

End: 861384

Strand: Reverse

Name: ydhD [C]

Synonym: P9303_09521

Alternate gene names: 124022661

Gene position: 861384-861061 (Counterclockwise)

Preceding gene: 124022662

Following gene: 124022660

Centisome position: 32.11

GC content: 48.46

Gene sequence:

>324_bases
ATGGATCCCACTACCAAAACACGTATTGAAGCCCTGATCCAATCAAGCCCGATCATGGTGTTCATGAAAGGCACAAAACT
GATGCCTCAGTGCGGCTTCTCCAACAATTGCGTGCAGATCCTCAACTCCCTCGGCATGAGCTTCGAAACCTTTGATGTGC
TCTCCGACATGGAAATTCGCCAAGGGATAAAGGACTACTCCAATTGGCCGACAATCCCCCAGGTTTATGTAAAAGGAGAA
TTTATCGGCGGATCAGACATCTTGATTGAGATGTACAACGCGGGAGAATTGGCCGAGAAGCTTGAGATCGCTCTTAGCAG
CTAG

Upstream 100 bases:

>100_bases
GGTCTATGGGGCCCTCAAAGATCAGCTCGCTAGTGAAGTTATCCATGCCCTGGCCTTAAGCACCTCTACTCCCAACTAAA
CCCTATCCCCCTTGTTTTCG

Downstream 100 bases:

>100_bases
AATTTCGAGCTTTAATTCGTTAAATTTTAGCAATTGAATGCCGTTACTACTCGCCACAACCTTGCAAGCAAATCTCCTCT
ATGGAGTGGCTGTGATCGGA

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDPTTKTRIEALIQSSPIMVFMKGTKLMPQCGFSNNCVQILNSLGMSFETFDVLSDMEIRQGIKDYSNWPTIPQVYVKGE
FIGGSDILIEMYNAGELAEKLEIALSS

Sequences:

>Translated_107_residues
MDPTTKTRIEALIQSSPIMVFMKGTKLMPQCGFSNNCVQILNSLGMSFETFDVLSDMEIRQGIKDYSNWPTIPQVYVKGE
FIGGSDILIEMYNAGELAEKLEIALSS
>Mature_107_residues
MDPTTKTRIEALIQSSPIMVFMKGTKLMPQCGFSNNCVQILNSLGMSFETFDVLSDMEIRQGIKDYSNWPTIPQVYVKGE
FIGGSDILIEMYNAGELAEKLEIALSS

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=96, Percent_Identity=55.2083333333333, Blast_Score=121, Evalue=1e-28,
Organism=Homo sapiens, GI95113651, Length=95, Percent_Identity=52.6315789473684, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787943, Length=96, Percent_Identity=45.8333333333333, Blast_Score=102, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17556042, Length=98, Percent_Identity=47.9591836734694, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71988159, Length=95, Percent_Identity=47.3684210526316, Blast_Score=105, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71988153, Length=94, Percent_Identity=47.8723404255319, Blast_Score=103, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325198, Length=102, Percent_Identity=48.0392156862745, Blast_Score=106, Evalue=5e-25,
Organism=Saccharomyces cerevisiae, GI6321022, Length=84, Percent_Identity=47.6190476190476, Blast_Score=96, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320303, Length=84, Percent_Identity=46.4285714285714, Blast_Score=93, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24642023, Length=99, Percent_Identity=47.4747474747475, Blast_Score=118, Evalue=9e-28,
Organism=Drosophila melanogaster, GI19921242, Length=99, Percent_Identity=51.5151515151515, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11918; Mature: 11918

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPTTKTRIEALIQSSPIMVFMKGTKLMPQCGFSNNCVQILNSLGMSFETFDVLSDMEIR
CCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
QGIKDYSNWPTIPQVYVKGEFIGGSDILIEMYNAGELAEKLEIALSS
HHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDPTTKTRIEALIQSSPIMVFMKGTKLMPQCGFSNNCVQILNSLGMSFETFDVLSDMEIR
CCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
QGIKDYSNWPTIPQVYVKGEFIGGSDILIEMYNAGELAEKLEIALSS
HHHHHHCCCCCCCEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]