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The map label for this gene is ylbH [H]

Identifier: 124022619

GI number: 124022619

Start: 825065

End: 825709

Strand: Reverse

Name: ylbH [H]

Synonym: P9303_09101

Alternate gene names: 124022619

Gene position: 825709-825065 (Counterclockwise)

Preceding gene: 124022620

Following gene: 124022618

Centisome position: 30.78

GC content: 53.33

Gene sequence:

>645_bases
ATGAGTAGCCAGCTAAGGCTCTCCGGAGGGCGCAAGCTGCAGAGTCCCGCTGGCCAAGGCACTAGACCCACGACGAGTCG
TGTTCGTGAAGCAGTGATGAACGTGCTAGCCCCACGCTTGCATGACTGCCACTGGCTTGACCTATTTAGCGGCAGTGGAA
TAATGGGCTGTGAGGCGTTGCAAAGCGGCGCACGACGTGTGGTGGCTGTTGAACGAAACGCGAAGACAGCCAAAGTCTGT
CAGGCCAACCTAATTGCCACCGCCTCAGGCCTCTCCCAGCAGAGCAACATTGAAGTGATCCGCCATGACGTACTGAGCTG
GCTGAAGAGAGGTTGCCATGCAGCCAAGTTCAATCAACCTTGGGCAGGGGAAAACCCTGGTTTCAACCTGGTCTACCTCG
ATCCACCTTATTCTTCAAAACTCTATTCAGAAGTATTCAAAGCCCTGCTTTCAGGCCATTGGTTGCAGAGAGATGCGCTA
GTGATCTGTGAGCATGCCACGAACAACAGCTTGGAAACCCCAATGCAGTGGCTTGAACAAGATCGCCGTATCTATGGCAG
CAGCGCCTTACTGTTCACCAATCCCCCAGAACAGTATCGCGACGATACTGATTCCAAGCATCCACAAACAATCCAAGCAA
AGTGA

Upstream 100 bases:

>100_bases
TAGGGGCCTGTCAGTTTCACCCAGAGAAATCCGCCGCAGCCGGCGAGCGCATGCTGCGGCGCTGGCTGAAGTGGCTGGAG
ACCGGCGCAAAACCTGTGCC

Downstream 100 bases:

>100_bases
CCGGAATCAAACCCAGAACGATGCCGCAGAGAAGTGGTTCGATCATGGCCTCGCGCCCAGTTGAAAGATTAAGCACAATT
GTTTCATGCTCCTGAACTCA

Product: N6-adenine-specific methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSSQLRLSGGRKLQSPAGQGTRPTTSRVREAVMNVLAPRLHDCHWLDLFSGSGIMGCEALQSGARRVVAVERNAKTAKVC
QANLIATASGLSQQSNIEVIRHDVLSWLKRGCHAAKFNQPWAGENPGFNLVYLDPPYSSKLYSEVFKALLSGHWLQRDAL
VICEHATNNSLETPMQWLEQDRRIYGSSALLFTNPPEQYRDDTDSKHPQTIQAK

Sequences:

>Translated_214_residues
MSSQLRLSGGRKLQSPAGQGTRPTTSRVREAVMNVLAPRLHDCHWLDLFSGSGIMGCEALQSGARRVVAVERNAKTAKVC
QANLIATASGLSQQSNIEVIRHDVLSWLKRGCHAAKFNQPWAGENPGFNLVYLDPPYSSKLYSEVFKALLSGHWLQRDAL
VICEHATNNSLETPMQWLEQDRRIYGSSALLFTNPPEQYRDDTDSKHPQTIQAK
>Mature_213_residues
SSQLRLSGGRKLQSPAGQGTRPTTSRVREAVMNVLAPRLHDCHWLDLFSGSGIMGCEALQSGARRVVAVERNAKTAKVCQ
ANLIATASGLSQQSNIEVIRHDVLSWLKRGCHAAKFNQPWAGENPGFNLVYLDPPYSSKLYSEVFKALLSGHWLQRDALV
ICEHATNNSLETPMQWLEQDRRIYGSSALLFTNPPEQYRDDTDSKHPQTIQAK

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential) [H]

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family [H]

Homologues:

Organism=Escherichia coli, GI1789875, Length=208, Percent_Identity=31.7307692307692, Blast_Score=94, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 23814; Mature: 23683

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQLRLSGGRKLQSPAGQGTRPTTSRVREAVMNVLAPRLHDCHWLDLFSGSGIMGCEAL
CCCCEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
QSGARRVVAVERNAKTAKVCQANLIATASGLSQQSNIEVIRHDVLSWLKRGCHAAKFNQP
HHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WAGENPGFNLVYLDPPYSSKLYSEVFKALLSGHWLQRDALVICEHATNNSLETPMQWLEQ
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
DRRIYGSSALLFTNPPEQYRDDTDSKHPQTIQAK
HHHHHCCCEEEECCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSQLRLSGGRKLQSPAGQGTRPTTSRVREAVMNVLAPRLHDCHWLDLFSGSGIMGCEAL
CCCEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
QSGARRVVAVERNAKTAKVCQANLIATASGLSQQSNIEVIRHDVLSWLKRGCHAAKFNQP
HHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WAGENPGFNLVYLDPPYSSKLYSEVFKALLSGHWLQRDALVICEHATNNSLETPMQWLEQ
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
DRRIYGSSALLFTNPPEQYRDDTDSKHPQTIQAK
HHHHHCCCEEEECCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]