| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022617
Identifier: 124022617
GI number: 124022617
Start: 822751
End: 823725
Strand: Reverse
Name: 124022617
Synonym: P9303_09081
Alternate gene names: NA
Gene position: 823725-822751 (Counterclockwise)
Preceding gene: 124022618
Following gene: 124022616
Centisome position: 30.71
GC content: 41.23
Gene sequence:
>975_bases ATGGATGATTTATTGTCGAACCCACCATTATCCAAGCACGATTGGATGGTATTTAACAGAGAGATTAGAAAGTGGGTTAA AGAAGGTGAGAACAATAGTAATCACCGCGTGCATCTATGGCGGGTATTATTCTGGACATGGACATTGGTAGCGAAGAACA GTGGTGCTAGACCTGAGGAGCTACGTAAACTAAAGTGGAAGGAAGTAGAAGTTAGAGATGTAGGCAGGATTAGTCTGTCT AAGTTGGAACAGGAGATTGCAGAACTAGAAGAGGAAGGTATTGAAGTAATAGGTGAAGATGAACCAAGTAATGGATGGGC AAGTAACCCTGCTGCGTTAGGCCGTGAAGAACGGCTGATTGCTTACATCACTGTTACATCAGGCAAAACAGGACAATATA GAGAAATACCAACCAGTCTCGGTTCAGTATTCTTACGGTGGCGAGATTACATAAACGCCTACTATGAAAGGCACAACATC AAGCGCAGCGTAAGTGGAAGTGACTTAGTATTTGGCAACATAAATAATGATTGCAACCCTTATGTTCACTATAACTTTCA TCTGGCCTGGGCTCACATAAGAGATAGGGTTAAAGACCAGTTGGAGGGTAACAAATTTAGCGATGAACCATATAGTATTT ACTCCATGCGCGGAACAATGATTCAGGATAAGCTTCTTCAGGGCCTAGATATCTTCCTGTTGAGCCGCATCAGCGGTCAT TCACCTGATGTTCTTCTTCGATATTACGACAGATTAGATATCAGAGAAAGGGCTGAAGAGATAACTTCTGTAGGCTATGG AGTACGAAGTAAGCAGGATGTAAAGGTAGATCTATACAACAACAAACAAACAGAACAAACAAAAGAAACACCTAAACTAT GGAGTAAAGATGATTCGTATTCATATCAACGATCTTCACGCAAAGATAGAACTACCATTAACACACGCAAAGCAGTTACT GCTGAAGAACAGTAA
Upstream 100 bases:
>100_bases CAAGATAAAAGACTTCATATCAAATCATTTAGTCAAACACAAGTTAATAGAGCCTGAAGTTGGTGCATCAAAAACATTAT TTCCTAAGGTCACAATAAGG
Downstream 100 bases:
>100_bases ATGTAAAAGCATAATCAAAGGTGATCGAGCTGTTCTTATATATCCATTGAAGGAAATACAAACATTAAAATCACTGCTTA ATTACGACAGACATCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MDDLLSNPPLSKHDWMVFNREIRKWVKEGENNSNHRVHLWRVLFWTWTLVAKNSGARPEELRKLKWKEVEVRDVGRISLS KLEQEIAELEEEGIEVIGEDEPSNGWASNPAALGREERLIAYITVTSGKTGQYREIPTSLGSVFLRWRDYINAYYERHNI KRSVSGSDLVFGNINNDCNPYVHYNFHLAWAHIRDRVKDQLEGNKFSDEPYSIYSMRGTMIQDKLLQGLDIFLLSRISGH SPDVLLRYYDRLDIRERAEEITSVGYGVRSKQDVKVDLYNNKQTEQTKETPKLWSKDDSYSYQRSSRKDRTTINTRKAVT AEEQ
Sequences:
>Translated_324_residues MDDLLSNPPLSKHDWMVFNREIRKWVKEGENNSNHRVHLWRVLFWTWTLVAKNSGARPEELRKLKWKEVEVRDVGRISLS KLEQEIAELEEEGIEVIGEDEPSNGWASNPAALGREERLIAYITVTSGKTGQYREIPTSLGSVFLRWRDYINAYYERHNI KRSVSGSDLVFGNINNDCNPYVHYNFHLAWAHIRDRVKDQLEGNKFSDEPYSIYSMRGTMIQDKLLQGLDIFLLSRISGH SPDVLLRYYDRLDIRERAEEITSVGYGVRSKQDVKVDLYNNKQTEQTKETPKLWSKDDSYSYQRSSRKDRTTINTRKAVT AEEQ >Mature_324_residues MDDLLSNPPLSKHDWMVFNREIRKWVKEGENNSNHRVHLWRVLFWTWTLVAKNSGARPEELRKLKWKEVEVRDVGRISLS KLEQEIAELEEEGIEVIGEDEPSNGWASNPAALGREERLIAYITVTSGKTGQYREIPTSLGSVFLRWRDYINAYYERHNI KRSVSGSDLVFGNINNDCNPYVHYNFHLAWAHIRDRVKDQLEGNKFSDEPYSIYSMRGTMIQDKLLQGLDIFLLSRISGH SPDVLLRYYDRLDIRERAEEITSVGYGVRSKQDVKVDLYNNKQTEQTKETPKLWSKDDSYSYQRSSRKDRTTINTRKAVT AEEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37949; Mature: 37949
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLLSNPPLSKHDWMVFNREIRKWVKEGENNSNHRVHLWRVLFWTWTLVAKNSGARPEE CCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHH LRKLKWKEVEVRDVGRISLSKLEQEIAELEEEGIEVIGEDEPSNGWASNPAALGREERLI HHHCCCCEECHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHCCCCCEEE AYITVTSGKTGQYREIPTSLGSVFLRWRDYINAYYERHNIKRSVSGSDLVFGNINNDCNP EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC YVHYNFHLAWAHIRDRVKDQLEGNKFSDEPYSIYSMRGTMIQDKLLQGLDIFLLSRISGH EEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC SPDVLLRYYDRLDIRERAEEITSVGYGVRSKQDVKVDLYNNKQTEQTKETPKLWSKDDSY CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCC SYQRSSRKDRTTINTRKAVTAEEQ CHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDDLLSNPPLSKHDWMVFNREIRKWVKEGENNSNHRVHLWRVLFWTWTLVAKNSGARPEE CCCCCCCCCCCCCCHHEEHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHH LRKLKWKEVEVRDVGRISLSKLEQEIAELEEEGIEVIGEDEPSNGWASNPAALGREERLI HHHCCCCEECHHHCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHCCCCCEEE AYITVTSGKTGQYREIPTSLGSVFLRWRDYINAYYERHNIKRSVSGSDLVFGNINNDCNP EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCC YVHYNFHLAWAHIRDRVKDQLEGNKFSDEPYSIYSMRGTMIQDKLLQGLDIFLLSRISGH EEEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCC SPDVLLRYYDRLDIRERAEEITSVGYGVRSKQDVKVDLYNNKQTEQTKETPKLWSKDDSY CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHCCCHHCCCCCCC SYQRSSRKDRTTINTRKAVTAEEQ CHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA