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The map label for this gene is ygdK [C]

Identifier: 124022598

GI number: 124022598

Start: 806537

End: 806998

Strand: Reverse

Name: ygdK [C]

Synonym: P9303_08891

Alternate gene names: 124022598

Gene position: 806998-806537 (Counterclockwise)

Preceding gene: 124022599

Following gene: 124022597

Centisome position: 30.08

GC content: 54.76

Gene sequence:

>462_bases
ATGGCTGAGCCCACCGCCGCATCCTCAAGCTTTGGCAGTCAAGCCCTAGACAGCATGGTCGAGAGACTTAACGGCACTTC
TGACCCGCGCCGCCGCTACGAATATGTTCTATGGCTGGCCAAAAAGCTGCCACCAATGTCCCCTGACTTACAAACCGACG
CCGTCAAGGTCAAGGGATGCGTTTCTCAGGTCCATGTCCTTGGTGAACTCGTGGAAGGGCGGCTTCACTGGCAAGGAGAC
TCCGACGCATTGATTACAAGAGGCTTGCTGGCAATGCTGATTCAAGGCCTCAGCAATCTCACCCCTGAGCAAGTCATGGC
AGTGAACCCAAGCTTCATTGAAGCCACAGGCCTTCAAGGCAGCCTCACCCCATCAAGAGCTAACGGATTCCTCAATATCC
TCCTCAATATGAAGGCCCAGGCCCAGCAGCTTGCAAGGGTTTCGTCTTCCACAACTTCCTAG

Upstream 100 bases:

>100_bases
GCCATCGTTCCTGATCAGCACGGAATCACCTCTCCTGCTGGGTCTTGCAGGTGTTTTGTTTAGCGTGCGTCAGCAGCGCC
TCAAATTCTGATCTTTCGCC

Downstream 100 bases:

>100_bases
AGTCCTACCAGCTAGTACAAGACTGGACACAGCTGCCATGGGCAAGAAGATAGGAGTTGGTCTCCTGGGGCTTGGAACAG
TAGGCGCCGGTGTTGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAEPTAASSSFGSQALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPDLQTDAVKVKGCVSQVHVLGELVEGRLHWQGD
SDALITRGLLAMLIQGLSNLTPEQVMAVNPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS

Sequences:

>Translated_153_residues
MAEPTAASSSFGSQALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPDLQTDAVKVKGCVSQVHVLGELVEGRLHWQGD
SDALITRGLLAMLIQGLSNLTPEQVMAVNPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
>Mature_152_residues
AEPTAASSSFGSQALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPDLQTDAVKVKGCVSQVHVLGELVEGRLHWQGDS
DALITRGLLAMLIQGLSNLTPEQVMAVNPSFIEATGLQGSLTPSRANGFLNILLNMKAQAQQLARVSSSTTS

Specific function: Unknown

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family [H]

Homologues:

Organism=Escherichia coli, GI1789176, Length=140, Percent_Identity=31.4285714285714, Blast_Score=63, Evalue=8e-12,
Organism=Escherichia coli, GI1787969, Length=102, Percent_Identity=34.3137254901961, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003808 [H]

Pfam domain/function: PF02657 SufE [H]

EC number: NA

Molecular weight: Translated: 16483; Mature: 16352

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPTAASSSFGSQALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPDLQTDAVKVKGC
CCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VSQVHVLGELVEGRLHWQGDSDALITRGLLAMLIQGLSNLTPEQVMAVNPSFIEATGLQG
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHEECCCCC
SLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AEPTAASSSFGSQALDSMVERLNGTSDPRRRYEYVLWLAKKLPPMSPDLQTDAVKVKGC
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
VSQVHVLGELVEGRLHWQGDSDALITRGLLAMLIQGLSNLTPEQVMAVNPSFIEATGLQG
HHHHHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHEECCCCC
SLTPSRANGFLNILLNMKAQAQQLARVSSSTTS
CCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]