| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022593
Identifier: 124022593
GI number: 124022593
Start: 800590
End: 802182
Strand: Direct
Name: 124022593
Synonym: P9303_08841
Alternate gene names: NA
Gene position: 800590-802182 (Clockwise)
Preceding gene: 124022588
Following gene: 124022608
Centisome position: 29.84
GC content: 54.68
Gene sequence:
>1593_bases TTGGCATTAACACGCCCTATTGGACAACGAATTGTGATTGGGCTATTCGGCGCTCTGCTGTTCGGTCTTGCTGGAGTATT GCCGCTGAGAGCTGCGGAGCGATTGGAGGTGCAGCTTGAGGGGATGGTGATACCAGTTTGGATTAGGGAGTTGGTCGATT TGGGGCGGCCTGGGGGCAGCAGTAGTTCTGAACTCATCACCTGGCTCAATTTGCTCGATGCCGATAGCCGCTTCGATCTT TTTGAGCTGCTTCAGGCATCTTTGCTTACAGATCAGAGCATGGCTCGACAAATGCTGCGTAGTTGGGCAGGACGTCAGCT GCTTGATGCCGTCAGTGATTTGGTGAGGGTCGATGCCGACAGTAGTGGCATTGTCTTGTTCAACACTCTGGAACTGCTCT TGAACAGTCAGTCAGAGGTGACCGCTCTGGACTTGCTTGAAGAGCTCCCTGCTGAAAATGTACGCCTCGATCTTGATGCT CTACTTCAGGTGGCAAGTCGCTGGCGGCGTCAGTTGCAACAGCAGCAGCAGTTGGTGTTAGCGCTCGGGAGCTTTCCCGC AACACAAGTTCCAGTTTTGCAAGAGCTGTCAGGTCAGGAAGTTTTTGCCGCAGGACCTGAGTTCAAACCTTTGCCAGTGG CTCATCGCACCAAGCCCCTCCAGTTAGAGGTTTGGCGCCCACCTGATGGCACTCCGTTGCGGTCGAGCTGGGTGGTGCTC ATGCCAGGCTTGGGTGGAAGCCAGGATCATTTTCGTTGGTTGGCTCTCAGCCTTCAACGTAAGGGCTGGCCGGTTGTTGT GCTTGAGCATCCAGGTAGTGATGCCAGAGCGGTGCATGCCCTGCTGAAGGGGCAACGACTTGCACCTGGAGCAGAGGTGT TGCCTGACCGCTTGGCGGATCTACAGGCTGTCCTGCAGGCACGAGAGCAAGGCACGTTGGTATTGCCTGGTCAGAAGTTG GTGCTGATGGGTCACTCCCTTGGGGCACTGACGGCTCTATTGGCTGCTGGTATTACCCCGGAGCCTGGTTTGTATACCCG CTGTCGTAAGGCTCTAGACGATCTTCCTCTTACCAATCTCTCGCGCTTATTGCAATGTCAGTTGGTTGATGTGCAAATGC CAAAACTGCAGTCAATCCCCCAGCTAGAGGCAATCGTTGCTCTCAACAGTTTTGGTAGCTTGCTGTGGCCTCGTCATGGG GCTGTGCCTTTGTCGGTTCCAGTGTTGCTGACTGGCGGCACCCTTGATTTGATTACTCCTCCGCTGAGTGAGCAGCTCGA TTTGCTTTTAGCAATCTCACCCCATCCCGCTAGTCGAGTCGTGCTTGTGGAGGGTGCTAGCCATTTTTCACCGGTGCGGG TTGAAGGTCAGATGGGTGAGGATCGTGGCGATGATCTCTTTCAGCTAGGAGAAGAGCTGGTGGGGCGTCAGCCGTTAGCT GTGCAGCGATTGTTGGCAGTTGAGATTCAAATCTTTTTGCAGCAGGTTGAGGCTGGCGAAGCCCTTGAGGGCTCCACACA TCAGCAGGTCGGGGATTTGCGGCTTCATCGTTTGGATCGCAATGCAGCAGAGAGACTTCGCGAATCTCAGTAG
Upstream 100 bases:
>100_bases TCTGATCCGTCGATGGCACCCAGGAGCACCATTTACTGCACCGATCTAAGCGCTTCAAGGCTTGAGTGAAAATGGTTTCA CTCGTGAGCGGTATTAGGCG
Downstream 100 bases:
>100_bases CGGACGCGGGGATCAATCAGAGCAACAAGCAGATCCACGCTCACGCTTACCAGCACCATTAGGGCAGCCACGACAACCAC AATTCCTTGAACCACTGGGT
Product: dienelactone hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MALTRPIGQRIVIGLFGALLFGLAGVLPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDL FELLQASLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDADSSGIVLFNTLELLLNSQSEVTALDLLEELPAENVRLDLDA LLQVASRWRRQLQQQQQLVLALGSFPATQVPVLQELSGQEVFAAGPEFKPLPVAHRTKPLQLEVWRPPDGTPLRSSWVVL MPGLGGSQDHFRWLALSLQRKGWPVVVLEHPGSDARAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKL VLMGHSLGALTALLAAGITPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHG AVPLSVPVLLTGGTLDLITPPLSEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEDRGDDLFQLGEELVGRQPLA VQRLLAVEIQIFLQQVEAGEALEGSTHQQVGDLRLHRLDRNAAERLRESQ
Sequences:
>Translated_530_residues MALTRPIGQRIVIGLFGALLFGLAGVLPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDL FELLQASLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDADSSGIVLFNTLELLLNSQSEVTALDLLEELPAENVRLDLDA LLQVASRWRRQLQQQQQLVLALGSFPATQVPVLQELSGQEVFAAGPEFKPLPVAHRTKPLQLEVWRPPDGTPLRSSWVVL MPGLGGSQDHFRWLALSLQRKGWPVVVLEHPGSDARAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKL VLMGHSLGALTALLAAGITPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHG AVPLSVPVLLTGGTLDLITPPLSEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEDRGDDLFQLGEELVGRQPLA VQRLLAVEIQIFLQQVEAGEALEGSTHQQVGDLRLHRLDRNAAERLRESQ >Mature_529_residues ALTRPIGQRIVIGLFGALLFGLAGVLPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDLF ELLQASLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDADSSGIVLFNTLELLLNSQSEVTALDLLEELPAENVRLDLDAL LQVASRWRRQLQQQQQLVLALGSFPATQVPVLQELSGQEVFAAGPEFKPLPVAHRTKPLQLEVWRPPDGTPLRSSWVVLM PGLGGSQDHFRWLALSLQRKGWPVVVLEHPGSDARAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKLV LMGHSLGALTALLAAGITPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGA VPLSVPVLLTGGTLDLITPPLSEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEDRGDDLFQLGEELVGRQPLAV QRLLAVEIQIFLQQVEAGEALEGSTHQQVGDLRLHRLDRNAAERLRESQ
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57926; Mature: 57795
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTRPIGQRIVIGLFGALLFGLAGVLPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEHHHHHHHHHCCCCCCC SSSELITWLNLLDADSRFDLFELLQASLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDAD CHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGIVLFNTLELLLNSQSEVTALDLLEELPAENVRLDLDALLQVASRWRRQLQQQQQLVL CCCEEHHEEHHHHHCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH ALGSFPATQVPVLQELSGQEVFAAGPEFKPLPVAHRTKPLQLEVWRPPDGTPLRSSWVVL HHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE MPGLGGSQDHFRWLALSLQRKGWPVVVLEHPGSDARAVHALLKGQRLAPGAEVLPDRLAD ECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LQAVLQAREQGTLVLPGQKLVLMGHSLGALTALLAAGITPEPGLYTRCRKALDDLPLTNL HHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH SRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLTGGTLDLITP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCC PLSEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEDRGDDLFQLGEELVGRQPLA CCHHCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHH VQRLLAVEIQIFLQQVEAGEALEGSTHQQVGDLRLHRLDRNAAERLRESQ HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCC >Mature Secondary Structure ALTRPIGQRIVIGLFGALLFGLAGVLPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCEEEHHHHHHHHHCCCCCCC SSSELITWLNLLDADSRFDLFELLQASLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDAD CHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SSGIVLFNTLELLLNSQSEVTALDLLEELPAENVRLDLDALLQVASRWRRQLQQQQQLVL CCCEEHHEEHHHHHCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHH ALGSFPATQVPVLQELSGQEVFAAGPEFKPLPVAHRTKPLQLEVWRPPDGTPLRSSWVVL HHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEE MPGLGGSQDHFRWLALSLQRKGWPVVVLEHPGSDARAVHALLKGQRLAPGAEVLPDRLAD ECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHH LQAVLQAREQGTLVLPGQKLVLMGHSLGALTALLAAGITPEPGLYTRCRKALDDLPLTNL HHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHH SRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLTGGTLDLITP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCC PLSEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEDRGDDLFQLGEELVGRQPLA CCHHCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHH VQRLLAVEIQIFLQQVEAGEALEGSTHQQVGDLRLHRLDRNAAERLRESQ HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA