| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022590
Identifier: 124022590
GI number: 124022590
Start: 799061
End: 799426
Strand: Reverse
Name: 124022590
Synonym: P9303_08811
Alternate gene names: NA
Gene position: 799426-799061 (Counterclockwise)
Preceding gene: 124022591
Following gene: 124022589
Centisome position: 29.8
GC content: 56.83
Gene sequence:
>366_bases ATGGCTTACCCCGAGTCTCAAGTCGTAATGGGCGGTTTGGTGCATATCCCCGTTATCATTGGTGTTTTTTGGGCGCTAAA CAACCTAACCACAGGCGGCAGCAAAGCCAAGAAAGCCGCAGAAGCTGCAGCCAAGCAGGCTGCTGAGCAAGCAGCTGCCC AAGCTGCTGCGGAAGCTGCTGCCAAACAGGCTGCTGAGCAAGCAGCTGCCAAAGCTGCTGCGGAGGCTGCAGCCGCGAAA AAGGCAGCTGAGGCTGCAGCTCCAGCAACAACATCAGTGGCTCCAGTCAGCGGCGAAGCTGAAGCATCACAAGCTTCTAA CAACGACACTCAAGCCACTCCTGCCCCAGACCAAGAAGTGCTCTAG
Upstream 100 bases:
>100_bases AGAAATGCGATTCAACTGACAAAGATAAGATAAGTAATTAAGGCCTGTAAACTGGCTCTAGAACAGCCTATGATTGGTGA TGTTTGCCTAAACACCAAAG
Downstream 100 bases:
>100_bases GCATAGAGCAGATCCGCAGAAGTCATAAACATAAATCGATATAGATACACGTTCCGAAAAGTTGTTTGCAATTGTAAAAG CCTTGAGCAAGGCCAAATTT
Product: type I antifreeze protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAYPESQVVMGGLVHIPVIIGVFWALNNLTTGGSKAKKAAEAAAKQAAEQAAAQAAAEAAAKQAAEQAAAKAAAEAAAAK KAAEAAAPATTSVAPVSGEAEASQASNNDTQATPAPDQEVL
Sequences:
>Translated_121_residues MAYPESQVVMGGLVHIPVIIGVFWALNNLTTGGSKAKKAAEAAAKQAAEQAAAQAAAEAAAKQAAEQAAAKAAAEAAAAK KAAEAAAPATTSVAPVSGEAEASQASNNDTQATPAPDQEVL >Mature_120_residues AYPESQVVMGGLVHIPVIIGVFWALNNLTTGGSKAKKAAEAAAKQAAEQAAAQAAAEAAAKQAAEQAAAKAAAEAAAAKK AAEAAAPATTSVAPVSGEAEASQASNNDTQATPAPDQEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11766; Mature: 11635
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPESQVVMGGLVHIPVIIGVFWALNNLTTGGSKAKKAAEAAAKQAAEQAAAQAAAEAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKQAAEQAAAKAAAEAAAAKKAAEAAAPATTSVAPVSGEAEASQASNNDTQATPAPDQEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC L C >Mature Secondary Structure AYPESQVVMGGLVHIPVIIGVFWALNNLTTGGSKAKKAAEAAAKQAAEQAAAQAAAEAA CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKQAAEQAAAKAAAEAAAAKKAAEAAAPATTSVAPVSGEAEASQASNNDTQATPAPDQEV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA