| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022587
Identifier: 124022587
GI number: 124022587
Start: 797083
End: 797472
Strand: Direct
Name: 124022587
Synonym: P9303_08781
Alternate gene names: NA
Gene position: 797083-797472 (Clockwise)
Preceding gene: 124022586
Following gene: 124022588
Centisome position: 29.71
GC content: 42.56
Gene sequence:
>390_bases ATGAGTGTAGATCGCGAACGGATTAGCCTTGGAAATGCCTTGATTCGTTTTGCGCTTAAGCAAGGCGATGCAACGGCTAT TTCTCAGACTACCCTTCAGCTTTGTAAGGGAGATAGAGAGAAGGCAGATCTACTTTCCCTCTGGTTTATTGATGTTGGTA AAAGTTGCAAGCAATATCTTGGGACGATGACGGACAATCAAGTATTTATGCGCATGTGGATGCTCGGCAATGTAGATATC AAGCAGGTCTCAGAATCAGGTAAGCCAATCTTTATTCTAACAAAGAAAGGTGTCGAAAGAGTTAGGTATTCGCCGAAAGA GAAATGGTGCTATAAGCTTTTATGGGATAATCATGAGGTCTCTAGAGACGAGGAATGCGTCATTTCTTAG
Upstream 100 bases:
>100_bases TATTTAAGCCGGAGTGCACGGTGCTTTCTTGGCTAGAGTCAAGTTTATAATTTTGCTTGCGATTTTCGACTCCTTATATA TGCCCAACAGAAATGGCGCC
Downstream 100 bases:
>100_bases CAGGATTAGTGTTATTGAGCTTGCTTGTAGTACATGGCGAACCTGCTTTTGCTGATGGTGCACAAGAAGAATTCACAGGC CACATTCTGGAATGGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSVDRERISLGNALIRFALKQGDATAISQTTLQLCKGDREKADLLSLWFIDVGKSCKQYLGTMTDNQVFMRMWMLGNVDI KQVSESGKPIFILTKKGVERVRYSPKEKWCYKLLWDNHEVSRDEECVIS
Sequences:
>Translated_129_residues MSVDRERISLGNALIRFALKQGDATAISQTTLQLCKGDREKADLLSLWFIDVGKSCKQYLGTMTDNQVFMRMWMLGNVDI KQVSESGKPIFILTKKGVERVRYSPKEKWCYKLLWDNHEVSRDEECVIS >Mature_128_residues SVDRERISLGNALIRFALKQGDATAISQTTLQLCKGDREKADLLSLWFIDVGKSCKQYLGTMTDNQVFMRMWMLGNVDIK QVSESGKPIFILTKKGVERVRYSPKEKWCYKLLWDNHEVSRDEECVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14880; Mature: 14749
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDRERISLGNALIRFALKQGDATAISQTTLQLCKGDREKADLLSLWFIDVGKSCKQYL CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHH GTMTDNQVFMRMWMLGNVDIKQVSESGKPIFILTKKGVERVRYSPKEKWCYKLLWDNHEV CCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHCCCCCC SRDEECVIS CCCCCCCCC >Mature Secondary Structure SVDRERISLGNALIRFALKQGDATAISQTTLQLCKGDREKADLLSLWFIDVGKSCKQYL CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHH GTMTDNQVFMRMWMLGNVDIKQVSESGKPIFILTKKGVERVRYSPKEKWCYKLLWDNHEV CCCCCCHHHHHHHHHCCCCHHHHHCCCCEEEEEECCCHHHHCCCCHHHHHHHHHCCCCCC SRDEECVIS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA