| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022577
Identifier: 124022577
GI number: 124022577
Start: 786372
End: 787031
Strand: Reverse
Name: 124022577
Synonym: P9303_08681
Alternate gene names: NA
Gene position: 787031-786372 (Counterclockwise)
Preceding gene: 124022578
Following gene: 124022576
Centisome position: 29.34
GC content: 53.64
Gene sequence:
>660_bases ATGAATCTCAACCTGCGCAAACGACTGCAAAACCTAAAACTTGTAGCTGGTCTGGCAAAATTTTTGAAACATCCTGACCT GGACAGCGTGTTCTCAGTTGCAGGCAGTCTTAAAGACAGCCCACTGGCCGAGAAGATGGAAAGCCACCTGATGGCAAATG CACGCTTTCAGGAGATGGTGAAGGAGGATTGGCGGCCAAAACCGATAGACCTCAACGATCTGCAGAAGCTTCCGCAAGGA AGCCTTGGCCGCACCTACGCCGATCAACTACTCAGCCAAGACATCGATCCTTTGGCGCTGATCGATCCAACACCTGTGAC CTCCCCCAAGGAGTTCATCGTGCATCGCCTCAAGGAAACACACGACATCGTTCACGTGCTAACAGGCTTCGGTATCGATG GGGTAAGCGAGATTGGCCTGCAAGGGTTCAACCTTGCTCAGAACCGCTCCCCGCTCGCGGTGATGCTGATTTTTGGCGGC ATGCTCAACGCACTGCAAGACGATAAGCCGCTTGGCCCGCTGCTTCAGGCTCTAAGCCAAGGCTTCCAGATGGGACTAGA TGCTGACTTAGTTGTCGCTCACAAACTTGAAGAAGGCTGGGAGCGGCCACTTGTGCAATGGCGCGAAGAACTAAGGCTTC CGCACACCAACGCGAGCTAA
Upstream 100 bases:
>100_bases TTGTTGAAACCAACGCTTCCATTGCCCTCATCCCATGTATCTGGAGAGAACCAGTCACATTCTCTGAGTACATAAAACCC TCCACAAGGCAATCCTGCTG
Downstream 100 bases:
>100_bases GAATCAGTCTGAGCCGAACGCAGGTTCAGAACGCGTGGCCCTAGCCTCAAAGCAAGCTCCAGCCCTGCCAGTGTCACTGC GGCTCACAAACACCCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNLNLRKRLQNLKLVAGLAKFLKHPDLDSVFSVAGSLKDSPLAEKMESHLMANARFQEMVKEDWRPKPIDLNDLQKLPQG SLGRTYADQLLSQDIDPLALIDPTPVTSPKEFIVHRLKETHDIVHVLTGFGIDGVSEIGLQGFNLAQNRSPLAVMLIFGG MLNALQDDKPLGPLLQALSQGFQMGLDADLVVAHKLEEGWERPLVQWREELRLPHTNAS
Sequences:
>Translated_219_residues MNLNLRKRLQNLKLVAGLAKFLKHPDLDSVFSVAGSLKDSPLAEKMESHLMANARFQEMVKEDWRPKPIDLNDLQKLPQG SLGRTYADQLLSQDIDPLALIDPTPVTSPKEFIVHRLKETHDIVHVLTGFGIDGVSEIGLQGFNLAQNRSPLAVMLIFGG MLNALQDDKPLGPLLQALSQGFQMGLDADLVVAHKLEEGWERPLVQWREELRLPHTNAS >Mature_219_residues MNLNLRKRLQNLKLVAGLAKFLKHPDLDSVFSVAGSLKDSPLAEKMESHLMANARFQEMVKEDWRPKPIDLNDLQKLPQG SLGRTYADQLLSQDIDPLALIDPTPVTSPKEFIVHRLKETHDIVHVLTGFGIDGVSEIGLQGFNLAQNRSPLAVMLIFGG MLNALQDDKPLGPLLQALSQGFQMGLDADLVVAHKLEEGWERPLVQWREELRLPHTNAS
Specific function: Unknown
COG id: COG5031
COG function: function code H; Uncharacterized protein involved in ubiquinone biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24422; Mature: 24422
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNLRKRLQNLKLVAGLAKFLKHPDLDSVFSVAGSLKDSPLAEKMESHLMANARFQEMV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KEDWRPKPIDLNDLQKLPQGSLGRTYADQLLSQDIDPLALIDPTPVTSPKEFIVHRLKET HHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH HDIVHVLTGFGIDGVSEIGLQGFNLAQNRSPLAVMLIFGGMLNALQDDKPLGPLLQALSQ HHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFQMGLDADLVVAHKLEEGWERPLVQWREELRLPHTNAS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLNLRKRLQNLKLVAGLAKFLKHPDLDSVFSVAGSLKDSPLAEKMESHLMANARFQEMV CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH KEDWRPKPIDLNDLQKLPQGSLGRTYADQLLSQDIDPLALIDPTPVTSPKEFIVHRLKET HHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHH HDIVHVLTGFGIDGVSEIGLQGFNLAQNRSPLAVMLIFGGMLNALQDDKPLGPLLQALSQ HHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GFQMGLDADLVVAHKLEEGWERPLVQWREELRLPHTNAS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA