| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022537
Identifier: 124022537
GI number: 124022537
Start: 753431
End: 754093
Strand: Reverse
Name: 124022537
Synonym: P9303_08281
Alternate gene names: NA
Gene position: 754093-753431 (Counterclockwise)
Preceding gene: 124022538
Following gene: 124022536
Centisome position: 28.11
GC content: 55.35
Gene sequence:
>663_bases ATGGCAAAACCCGCGCTGATTGTGATGGCCCGCTGGCCGGCAGCAGGCAGATGCAAACGAAGACTGGCCACCAATCTTGG AATAGTGCGTGCAGCATCTATCCAGGCCAGGCTGAGCAAACACACTCTGTGCGTGGCAAATCATCTTGCCAATAGAGGTC TGGTCGAGCTGCAATTAGCGATCACTGGCCTCGCTCCCAAGGCAGCCAAGCGCTGGGCACACGATCAAGGTGTGAGAACA GTGGAGCCTCAAGGCAAGGGAAGCCTGGGTGAACGGATGCGTCGACAGGTTTTGCGAGCGCAGCAACGACACCATCCACA AATCAGCGCAGGTCGCACCACACTGCTGATCGGCACGGATCTGCCAAATCTCTGTGATCGGGATCTGCTTCAGGCCCTAG AGGCTTTGCAAGAGCATGAATTCGTGCTTGGACCCGCTACTGATGGGGGCTATTGGTTACTTGGACTCTCAGGGCGCTTG GTAAAGCCCGTGACACGCTGGCCCTTCTGCGGCATTCCTTGGGGGAGCAATCAAGTGAAGCAAGTCACACTGCAGAAAGC AGCGGATGCAGGAGTAAGGCCTTGCTTGCTTGGTCAACAAAACGATCTCGATTGCCTTGAAGATCTTTCAGCATGGCAAG CATGCGAGAAAGGATGGATATGA
Upstream 100 bases:
>100_bases GGAGGTTGGCAAGCCCATGCCGCTCACCCTTGAACGAAACGACAAGACGATCGAATTAATTGTGAAACCAGCAGAGCTAC CCCGGCAGGGGTGAATTGAA
Downstream 100 bases:
>100_bases CAAGGATATGAACCAGAAGCAACTGAATTAAGACTAGAAAATGAGACTGGGAACAACAAGATAACCTCTTTCAAAAAGGA AGCAGTGCCGCTCAAAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAKPALIVMARWPAAGRCKRRLATNLGIVRAASIQARLSKHTLCVANHLANRGLVELQLAITGLAPKAAKRWAHDQGVRT VEPQGKGSLGERMRRQVLRAQQRHHPQISAGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRL VKPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSAWQACEKGWI
Sequences:
>Translated_220_residues MAKPALIVMARWPAAGRCKRRLATNLGIVRAASIQARLSKHTLCVANHLANRGLVELQLAITGLAPKAAKRWAHDQGVRT VEPQGKGSLGERMRRQVLRAQQRHHPQISAGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRL VKPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSAWQACEKGWI >Mature_219_residues AKPALIVMARWPAAGRCKRRLATNLGIVRAASIQARLSKHTLCVANHLANRGLVELQLAITGLAPKAAKRWAHDQGVRTV EPQGKGSLGERMRRQVLRAQQRHHPQISAGRTTLLIGTDLPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLV KPVTRWPFCGIPWGSNQVKQVTLQKAADAGVRPCLLGQQNDLDCLEDLSAWQACEKGWI
Specific function: Unknown
COG id: COG3222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24150; Mature: 24019
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPALIVMARWPAAGRCKRRLATNLGIVRAASIQARLSKHTLCVANHLANRGLVELQLA CCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ITGLAPKAAKRWAHDQGVRTVEPQGKGSLGERMRRQVLRAQQRHHPQISAGRTTLLIGTD EECCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC LPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLVKPVTRWPFCGIPWGSNQVK CCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEECHHHHCCCCCCCCCCCHHH QVTLQKAADAGVRPCLLGQQNDLDCLEDLSAWQACEKGWI HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKPALIVMARWPAAGRCKRRLATNLGIVRAASIQARLSKHTLCVANHLANRGLVELQLA CCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE ITGLAPKAAKRWAHDQGVRTVEPQGKGSLGERMRRQVLRAQQRHHPQISAGRTTLLIGTD EECCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC LPNLCDRDLLQALEALQEHEFVLGPATDGGYWLLGLSGRLVKPVTRWPFCGIPWGSNQVK CCCHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEECCCCEECHHHHCCCCCCCCCCCHHH QVTLQKAADAGVRPCLLGQQNDLDCLEDLSAWQACEKGWI HHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA