| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022496
Identifier: 124022496
GI number: 124022496
Start: 721611
End: 722879
Strand: Direct
Name: 124022496
Synonym: P9303_07871
Alternate gene names: NA
Gene position: 721611-722879 (Clockwise)
Preceding gene: 124022494
Following gene: 124022498
Centisome position: 26.9
GC content: 54.22
Gene sequence:
>1269_bases GTGGGCGAAGGCTGGGAGCTGATGAAGATTCGGGGAATCCCTTTAAGGGTTCATCCCAGCTGGTTTGTGATCCTGTTGCT TTTTACCTGGATTTCACAAAATCAGGTGTCCGCTGCAGCTGAATCTTCGCTTCCAGCTTGGATCAGCTGGGGTCTGGGGT TGATTACGGCCCTGCTGTTGTTTTTGTCTGTTCTCCTGCATGAGCTAGGCCACTCTTTGGTTGCACTGCGTGAGGGGGTC AAGGTTCGCAGCATCACGCTTTTTTTCCTGGGAGGTGTTGCCAGCGTTGAGAGGGAGTGCTCTACACCGATGGCCTCTTT AAGGGTTGCTGCAGCCGGCCCACTGGTGAGCTTGGTGTTGGCTGTTGCCTTGCTGACGGGAGGGGTGTATGCAGCTGATC ACGTCAATCCGCTGCTTGCCAATCTCGTTGGGCAGTTGGGTGGGCTCAATTTGTTGCTTGCCCTTTTTAACTTGCTACCT GGGTTGCCTCTTGATGGAGGCTTGATCCTTAAGGCTTTGGTCTGGCAGTGGACTGGCAGTCAGAGGAAGGGTGTCCAGGT CGCCACAGCAACTGGCCGTGCCCTGTCTCTCTCGGCAATGGTGTTGGGGGGTTGGTTGCTCTTCTTTAAAGGTGGTGGGA TCGGTGGGCTTTGGCTGTTGATGCTTGGTTGGTTTGGTCTCGGTGCATCTCGCTCTCAAACCCAGCTACTTGCCTTGCAG AAGGTCTTGCGTGAGCTCAACGTGGGCCTGGCTGCTGGGCGCAACTTCCGTGTGCTTGAAGATGACCAGTCGTTGCGCAG GCTTAGTCAGTTGCGTTTGTCTGGAAGCGAGGAGCAGTCTCCTCCGGCGTGGGTTTTGGTTTGTCGCTCTGGTCGATGGG TTGGTTACATGACGGACCAACCCTTAAAAGAATTGCCTGTGCAGCAATGGGATAGGCAATGCCTGGCGGATCACATGAAA CCGATATCTGAGTTGCCTTCCATTGGCGAGAAAGCCCCTTTATGGCAGGCGGTGTTGGCACTAGAACAGGCTGAGGAGGG CAGGCTTCTTGTCTTTAATGTTGCTGGTCTTCCTTGCGGAACATTAGATCGAATTGATCTCTCCGAAGCTGTTCTTAAGC GTCTTGGGGTAAGGCTTCCTGCTCAGTTTCTCGAAGCTGCTCGCCGTCAGAACACCTATCCCCTGGGTATGGCACTGCCT AAAGTTGTGGAGTCGATGATCTCTGGCGGATTGGTTGAGCAGCCTGAGGCATCCAGCAGTACTTCATAG
Upstream 100 bases:
>100_bases CGGTGGATGTGGGAGACCCCATAGGCAAGACCATTGGCTCGAGACTTTTCTAAGATTGGTTTGCTACTGGCCGCTGATCC GGCTCGATGGAGATGAAAGG
Downstream 100 bases:
>100_bases TTCGCTGCTTCGTTGGCAACTGAGCTCCATTCATCGCTGGTGATAGGGCTCTCTTGCCAGCTCACCTCTGGCCAACAGGA GCAAAACGTTGTTTGCAGGT
Product: Zn-dependent protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MGEGWELMKIRGIPLRVHPSWFVILLLFTWISQNQVSAAAESSLPAWISWGLGLITALLLFLSVLLHELGHSLVALREGV KVRSITLFFLGGVASVERECSTPMASLRVAAAGPLVSLVLAVALLTGGVYAADHVNPLLANLVGQLGGLNLLLALFNLLP GLPLDGGLILKALVWQWTGSQRKGVQVATATGRALSLSAMVLGGWLLFFKGGGIGGLWLLMLGWFGLGASRSQTQLLALQ KVLRELNVGLAAGRNFRVLEDDQSLRRLSQLRLSGSEEQSPPAWVLVCRSGRWVGYMTDQPLKELPVQQWDRQCLADHMK PISELPSIGEKAPLWQAVLALEQAEEGRLLVFNVAGLPCGTLDRIDLSEAVLKRLGVRLPAQFLEAARRQNTYPLGMALP KVVESMISGGLVEQPEASSSTS
Sequences:
>Translated_422_residues MGEGWELMKIRGIPLRVHPSWFVILLLFTWISQNQVSAAAESSLPAWISWGLGLITALLLFLSVLLHELGHSLVALREGV KVRSITLFFLGGVASVERECSTPMASLRVAAAGPLVSLVLAVALLTGGVYAADHVNPLLANLVGQLGGLNLLLALFNLLP GLPLDGGLILKALVWQWTGSQRKGVQVATATGRALSLSAMVLGGWLLFFKGGGIGGLWLLMLGWFGLGASRSQTQLLALQ KVLRELNVGLAAGRNFRVLEDDQSLRRLSQLRLSGSEEQSPPAWVLVCRSGRWVGYMTDQPLKELPVQQWDRQCLADHMK PISELPSIGEKAPLWQAVLALEQAEEGRLLVFNVAGLPCGTLDRIDLSEAVLKRLGVRLPAQFLEAARRQNTYPLGMALP KVVESMISGGLVEQPEASSSTS >Mature_421_residues GEGWELMKIRGIPLRVHPSWFVILLLFTWISQNQVSAAAESSLPAWISWGLGLITALLLFLSVLLHELGHSLVALREGVK VRSITLFFLGGVASVERECSTPMASLRVAAAGPLVSLVLAVALLTGGVYAADHVNPLLANLVGQLGGLNLLLALFNLLPG LPLDGGLILKALVWQWTGSQRKGVQVATATGRALSLSAMVLGGWLLFFKGGGIGGLWLLMLGWFGLGASRSQTQLLALQK VLRELNVGLAAGRNFRVLEDDQSLRRLSQLRLSGSEEQSPPAWVLVCRSGRWVGYMTDQPLKELPVQQWDRQCLADHMKP ISELPSIGEKAPLWQAVLALEQAEEGRLLVFNVAGLPCGTLDRIDLSEAVLKRLGVRLPAQFLEAARRQNTYPLGMALPK VVESMISGGLVEQPEASSSTS
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 [H]
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 45545; Mature: 45414
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGWELMKIRGIPLRVHPSWFVILLLFTWISQNQVSAAAESSLPAWISWGLGLITALLL CCCCCEEEEEECCEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH FLSVLLHELGHSLVALREGVKVRSITLFFLGGVASVERECSTPMASLRVAAAGPLVSLVL HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCHHHHHHHHCCHHHHHHH AVALLTGGVYAADHVNPLLANLVGQLGGLNLLLALFNLLPGLPLDGGLILKALVWQWTGS HHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC QRKGVQVATATGRALSLSAMVLGGWLLFFKGGGIGGLWLLMLGWFGLGASRSQTQLLALQ CCCCCEEEECCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHH KVLRELNVGLAAGRNFRVLEDDQSLRRLSQLRLSGSEEQSPPAWVLVCRSGRWVGYMTDQ HHHHHHCCHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCC PLKELPVQQWDRQCLADHMKPISELPSIGEKAPLWQAVLALEQAEEGRLLVFNVAGLPCG CHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC TLDRIDLSEAVLKRLGVRLPAQFLEAARRQNTYPLGMALPKVVESMISGGLVEQPEASSS CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC TS CC >Mature Secondary Structure GEGWELMKIRGIPLRVHPSWFVILLLFTWISQNQVSAAAESSLPAWISWGLGLITALLL CCCCEEEEEECCEEEECHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHH FLSVLLHELGHSLVALREGVKVRSITLFFLGGVASVERECSTPMASLRVAAAGPLVSLVL HHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCHHHHHHHHCCCHHHHHHHHCCHHHHHHH AVALLTGGVYAADHVNPLLANLVGQLGGLNLLLALFNLLPGLPLDGGLILKALVWQWTGS HHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC QRKGVQVATATGRALSLSAMVLGGWLLFFKGGGIGGLWLLMLGWFGLGASRSQTQLLALQ CCCCCEEEECCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHH KVLRELNVGLAAGRNFRVLEDDQSLRRLSQLRLSGSEEQSPPAWVLVCRSGRWVGYMTDQ HHHHHHCCHHHCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEECCCC PLKELPVQQWDRQCLADHMKPISELPSIGEKAPLWQAVLALEQAEEGRLLVFNVAGLPCG CHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC TLDRIDLSEAVLKRLGVRLPAQFLEAARRQNTYPLGMALPKVVESMISGGLVEQPEASSS CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC TS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]