| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is psaJ
Identifier: 124022378
GI number: 124022378
Start: 629916
End: 630038
Strand: Reverse
Name: psaJ
Synonym: P9303_06691
Alternate gene names: 124022378
Gene position: 630038-629916 (Counterclockwise)
Preceding gene: 124022379
Following gene: 124022376
Centisome position: 23.49
GC content: 47.97
Gene sequence:
>123_bases ATGAGAAAATTCTTCGAAAGCTGGCCAATGGCTGCCGTTCTCTGGGTATGGCTCACAGCGGGAATCATTGTTGAATTCAA CCGCTTCTACCCAGATCTTCTCTTCCACCCAATGGGTCTTTGA
Upstream 100 bases:
>100_bases CCAAAATGGCAGCCTCCGTGAGAGCGACGACAAGATCACAGTTTCACCACGCTGAGCAATATTCTCCTCTTAACAACCAC CCCATTTCCCCTTTATCAAG
Downstream 100 bases:
>100_bases AGAGCTGAAAAGCATCAACAACTACAGCCAAGAAACAAATTAGCTTCTTGGCTAAACCCCTTCAAAAAGCCCTCTAAAAG GGCTTTTTTTATTGGCCTAT
Product: photosystem I reaction center subunit IX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 40
Protein sequence:
>40_residues MRKFFESWPMAAVLWVWLTAGIIVEFNRFYPDLLFHPMGL
Sequences:
>Translated_40_residues MRKFFESWPMAAVLWVWLTAGIIVEFNRFYPDLLFHPMGL >Mature_40_residues MRKFFESWPMAAVLWVWLTAGIIVEFNRFYPDLLFHPMGL
Specific function: May help in the organization of the psaE and psaF subunits
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaJ family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAJ_PROM3 (A2C7G0)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016685.1 - ProteinModelPortal: A2C7G0 - SMR: A2C7G0 - STRING: A2C7G0 - GeneID: 4778741 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_06691 - eggNOG: NOG14690 - HOGENOM: HBG440999 - ProtClustDB: PRK02733 - GO: GO:0015979 - HAMAP: MF_00522 - InterPro: IPR002615 - ProDom: PD004198
Pfam domain/function: PF01701 PSI_PsaJ; SSF81544 PSI_PsaJ
EC number: NA
Molecular weight: Translated: 4831; Mature: 4831
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12b0402c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFFESWPMAAVLWVWLTAGIIVEFNRFYPDLLFHPMGL CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure MRKFFESWPMAAVLWVWLTAGIIVEFNRFYPDLLFHPMGL CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA