Click here to switch to the map view.

The map label for this gene is rpfC [H]

Identifier: 124022337

GI number: 124022337

Start: 591008

End: 591424

Strand: Reverse

Name: rpfC [H]

Synonym: P9303_06271

Alternate gene names: 124022337

Gene position: 591424-591008 (Counterclockwise)

Preceding gene: 124022338

Following gene: 124022336

Centisome position: 22.05

GC content: 50.12

Gene sequence:

>417_bases
ATGAACCAAACCGATTCCCCTAATCGCATCGAAAAATCTGGTGAGACCCAGCCTCTTACCGTGGCCATAGTGGATGACGA
TCCCAGAGTTCGTGAATTGCTCAAGGAGGAAATTCAAGACGAAGGTCATCACGTCTTGAGCTTTGAATCGGCCGAAACCT
TTCTTGACAACAGCTCTTTGGAGAGCATTGATTTAGTTCTGCTGGACCTGATGATGCCAGGAATGAATGGGCTGGAATGC
CTGCAGCAACTGCATCGACAAGCTTGTCATGACAAATTGCCGAGGATTGTTGTTGTATCCGCCCTCAGTGACCCAAGCAA
GCAGCGCCAGGTACTGGAGGCCGGTGCTGAAAGCTATGTCATCAAACCAGACCTCTTCGAGAGACTTCCCACCCTCCTAA
ATGGATCCACACCCTGA

Upstream 100 bases:

>100_bases
TTTCCGAAAGGGCCGACCGAATGGCGCGCTTCCACGATGGTCAAGTCGTTCGGGACTGGAGCGCTGAGCTCGCTGCTACT
GATATCAGATCAATCAAAGA

Downstream 100 bases:

>100_bases
AGGAGGGGCCCACGCATAACCATTGATTGCACAAGGTCTCGATCCAGACAAACTGCTTAAGTAGACACCAGGTTTATTGC
ATGAATGACTAACGCATCAT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNQTDSPNRIEKSGETQPLTVAIVDDDPRVRELLKEEIQDEGHHVLSFESAETFLDNSSLESIDLVLLDLMMPGMNGLEC
LQQLHRQACHDKLPRIVVVSALSDPSKQRQVLEAGAESYVIKPDLFERLPTLLNGSTP

Sequences:

>Translated_138_residues
MNQTDSPNRIEKSGETQPLTVAIVDDDPRVRELLKEEIQDEGHHVLSFESAETFLDNSSLESIDLVLLDLMMPGMNGLEC
LQQLHRQACHDKLPRIVVVSALSDPSKQRQVLEAGAESYVIKPDLFERLPTLLNGSTP
>Mature_138_residues
MNQTDSPNRIEKSGETQPLTVAIVDDDPRVRELLKEEIQDEGHHVLSFESAETFLDNSSLESIDLVLLDLMMPGMNGLEC
LQQLHRQACHDKLPRIVVVSALSDPSKQRQVLEAGAESYVIKPDLFERLPTLLNGSTP

Specific function: Involved in the positive regulation of synthesis of extracellular enzymes and polysaccharide, and hence in pathogenicity. Can restore function to the non-pathogenic mutant 8237 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=103, Percent_Identity=35.9223300970874, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR004358
- InterPro:   IPR008207
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 15405; Mature: 15405

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTDSPNRIEKSGETQPLTVAIVDDDPRVRELLKEEIQDEGHHVLSFESAETFLDNSSL
CCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCC
ESIDLVLLDLMMPGMNGLECLQQLHRQACHDKLPRIVVVSALSDPSKQRQVLEAGAESYV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEE
IKPDLFERLPTLLNGSTP
ECHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNQTDSPNRIEKSGETQPLTVAIVDDDPRVRELLKEEIQDEGHHVLSFESAETFLDNSSL
CCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCC
ESIDLVLLDLMMPGMNGLECLQQLHRQACHDKLPRIVVVSALSDPSKQRQVLEAGAESYV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEE
IKPDLFERLPTLLNGSTP
ECHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1645442 [H]