| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022330
Identifier: 124022330
GI number: 124022330
Start: 584563
End: 585105
Strand: Reverse
Name: 124022330
Synonym: P9303_06201
Alternate gene names: NA
Gene position: 585105-584563 (Counterclockwise)
Preceding gene: 124022334
Following gene: 124022328
Centisome position: 21.81
GC content: 58.93
Gene sequence:
>543_bases ATGGCCATAGCTCCCGATCAGCAACGCAAACGGCTTGGTCGAGGAGAAGTGCTGCAAGAAGCGCCTCCCGCCCCAGTCAC AGCCCTATGCAACTGCCTTGAATCCATTAAGCGTGACTGGAAGCGACAAGGCTCCATGGCTGGTCTCTGGCAAGAATGGC CCCGACTGGCAGGTCCCCTGCTTGCCCCTCACTGCCGCCCACTCAACGTTCGCCAAGGGGTTTTGATCATCGGCGCCAGC CATCCTCAGTGGAGGCAGGCCCTGCTCTATAACCGCCCCCAACTCTTGGCAGCCCTGCGTGCCGCGGGCCATGACATCAA AGATCTCCGCATTCAACAACACCACCCCGGAAGCACCCCAAAGCTGGAAAGTGAAGCCAGCATCTGGGCACGACATCCAA GCAGAATTGATGTTCATGGAATGGCCGCCTGTCAGGCCTGCGGTAGTCCTGCCCCAGCTGGAGAAATGGCCCTCTGGGGA CGATGTGGTTTCTGTAGAAGACTTCAACTTGCTGACCCGCCCCAATCGGAGACCAACGCTTAA
Upstream 100 bases:
>100_bases GTAATAAGCGGCTTAACCGGTCAAAGAAGCCCATCGAGGCATTGAAAAGACCTCTCGGAGGCTAGCGAGCTGGAGCCAAG ACTCCACTTAGGCTTTTGAG
Downstream 100 bases:
>100_bases ATCCTGCTCACGCACCATGCAAGACGTCTTGCTCGCATGGTGGTCCAAAAGCAAATGACAAGAGCACGCCGAAGCTCCCA CTTCATCCTGCAATTAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MAIAPDQQRKRLGRGEVLQEAPPAPVTALCNCLESIKRDWKRQGSMAGLWQEWPRLAGPLLAPHCRPLNVRQGVLIIGAS HPQWRQALLYNRPQLLAALRAAGHDIKDLRIQQHHPGSTPKLESEASIWARHPSRIDVHGMAACQACGSPAPAGEMALWG RCGFCRRLQLADPPQSETNA
Sequences:
>Translated_180_residues MAIAPDQQRKRLGRGEVLQEAPPAPVTALCNCLESIKRDWKRQGSMAGLWQEWPRLAGPLLAPHCRPLNVRQGVLIIGAS HPQWRQALLYNRPQLLAALRAAGHDIKDLRIQQHHPGSTPKLESEASIWARHPSRIDVHGMAACQACGSPAPAGEMALWG RCGFCRRLQLADPPQSETNA >Mature_179_residues AIAPDQQRKRLGRGEVLQEAPPAPVTALCNCLESIKRDWKRQGSMAGLWQEWPRLAGPLLAPHCRPLNVRQGVLIIGASH PQWRQALLYNRPQLLAALRAAGHDIKDLRIQQHHPGSTPKLESEASIWARHPSRIDVHGMAACQACGSPAPAGEMALWGR CGFCRRLQLADPPQSETNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19829; Mature: 19698
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAPDQQRKRLGRGEVLQEAPPAPVTALCNCLESIKRDWKRQGSMAGLWQEWPRLAGPL CCCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC LAPHCRPLNVRQGVLIIGASHPQWRQALLYNRPQLLAALRAAGHDIKDLRIQQHHPGSTP CCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCHHHCEEECCCCCCCC KLESEASIWARHPSRIDVHGMAACQACGSPAPAGEMALWGRCGFCRRLQLADPPQSETNA CCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEHHCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure AIAPDQQRKRLGRGEVLQEAPPAPVTALCNCLESIKRDWKRQGSMAGLWQEWPRLAGPL CCCCCHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC LAPHCRPLNVRQGVLIIGASHPQWRQALLYNRPQLLAALRAAGHDIKDLRIQQHHPGSTP CCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHCCCCHHHCEEECCCCCCCC KLESEASIWARHPSRIDVHGMAACQACGSPAPAGEMALWGRCGFCRRLQLADPPQSETNA CCCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEHHCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA