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The map label for this gene is petF1 [H]

Identifier: 124022236

GI number: 124022236

Start: 514569

End: 514868

Strand: Direct

Name: petF1 [H]

Synonym: P9303_05261

Alternate gene names: 124022236

Gene position: 514569-514868 (Clockwise)

Preceding gene: 124022235

Following gene: 124022237

Centisome position: 19.18

GC content: 54.33

Gene sequence:

>300_bases
ATGGCTTCCTACAAAGTCACCTTGATCAGCGAGAGCGAGGGCCTGAACAAGACCATTGAGGTTCCCGATGATCAGTACAT
CCTTGATGCTGCTGAAGAGCAGGGCATCGACCTGCCCTATTCCTGCCGTGCTGGGGCCTGCTCCACATGTGCAGGCAAGC
TCACAGGTGGCTCTGTGGACCAGTCTGATCAGAGCTTCCTCGACGACGATCAGCTTGAGGCTGGTTTCGTGTTGACCTGC
GTTGCTTATCCAACCTCTGATTGCACCATCAAGACCCATGCTGAGGAAGAGCTCTATTGA

Upstream 100 bases:

>100_bases
GCAGATTGCACGATCAGACTGTATTTTTGCTGTGAGGGTGTTAGAAGGAGCGATCCAGGGGCGTTTTACTTCTGGATTTC
TATGCGTTTCCATCCATTCC

Downstream 100 bases:

>100_bases
GCTCAGGGCAGTTGTCTCTGTTCCCGATCAGTGCTTGCGAATTGGGATCCCATCAGCCACCCTCAGCGGGTGGCTTTTTG
CTTCATGGTGGTGTTGATGG

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MASYKVTLISESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTGGSVDQSDQSFLDDDQLEAGFVLTC
VAYPTSDCTIKTHAEEELY

Sequences:

>Translated_99_residues
MASYKVTLISESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTGGSVDQSDQSFLDDDQLEAGFVLTC
VAYPTSDCTIKTHAEEELY
>Mature_98_residues
ASYKVTLISESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTGGSVDQSDQSFLDDDQLEAGFVLTCV
AYPTSDCTIKTHAEEELY

Specific function: Principal electron carrier in NADP-photoreduction [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1787658, Length=88, Percent_Identity=44.3181818181818, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 10652; Mature: 10521

Theoretical pI: Translated: 3.70; Mature: 3.70

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASYKVTLISESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTGGSVD
CCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQLEAGFVLTCVAYPTSDCTIKTHAEEELY
CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ASYKVTLISESEGLNKTIEVPDDQYILDAAEEQGIDLPYSCRAGACSTCAGKLTGGSVD
CCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QSDQSFLDDDQLEAGFVLTCVAYPTSDCTIKTHAEEELY
CCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA