Click here to switch to the map view.

The map label for this gene is atpC

Identifier: 124022211

GI number: 124022211

Start: 493143

End: 493544

Strand: Reverse

Name: atpC

Synonym: P9303_05011

Alternate gene names: 124022211

Gene position: 493544-493143 (Counterclockwise)

Preceding gene: 124022212

Following gene: 124022210

Centisome position: 18.4

GC content: 53.73

Gene sequence:

>402_bases
ATGTCTCTCACCCTCCGCGTTCTGGCACCTGACCAGAGTGTGTTCGACGGCACTGCCGAAGAGGTGATTCTTCCCAGCAC
CACAGGCCTAATTGGCATCCTGCCAGGCCACATATCGCTTGTCACAGCCCTGGATATCGGTGTGATGAGGGTTCGAACCA
ATGGGGCCTGGAACTCCATTGCCCTGATGGGTGGATTCGCCGAAGTTGAAGCAGACGATGTCACCGTGTTGGTGAATGGT
GCCGAACTCGGCGATAGCATTGATGCAACAACGGCTGAAGCAGAGCTGGAACAAGCCAAAGCCAAAGTGAGCCAAATGGA
AGGTCAGGAACCTTCAACCGAAAAAATAAAAGCACAGCAGACCTTCAATCGCGCCCGAGCGCGAGTTCAAGCCACTAAAT
AA

Upstream 100 bases:

>100_bases
AGAAGCAAAGGGTTAAAGCCCAGCGGGGAGTGAGACATCTCTCCGCTGATCACTTTCATCTCCATTCAGTTTCTCCACGT
CAAACCCAAGCCTGCGAACC

Downstream 100 bases:

>100_bases
GCAAATTAATAGGCAGCTGCTGAGGACATTGAGTTGACTCTGCAGCTCTTACTCGACAGCGCAGACCCAAGCGAATGGGA
AGCATGGCTTCCTACAGGCC

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSLTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRTNGAWNSIALMGGFAEVEADDVTVLVNG
AELGDSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQTFNRARARVQATK

Sequences:

>Translated_133_residues
MSLTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRTNGAWNSIALMGGFAEVEADDVTVLVNG
AELGDSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQTFNRARARVQATK
>Mature_132_residues
SLTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRTNGAWNSIALMGGFAEVEADDVTVLVNGA
ELGDSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQTFNRARARVQATK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=109, Percent_Identity=33.9449541284404, Blast_Score=63, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_PROM3 (A2C6Z3)

Other databases:

- EMBL:   CP000554
- RefSeq:   YP_001016518.1
- ProteinModelPortal:   A2C6Z3
- SMR:   A2C6Z3
- STRING:   A2C6Z3
- GeneID:   4777158
- GenomeReviews:   CP000554_GR
- KEGG:   pmf:P9303_05011
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   NNAEIGS
- ProtClustDB:   PRK00571
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14052; Mature: 13921

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRTNGAWNSI
CCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCHHEEEHHHCEEEEEEECCCCCCEE
ALMGGFAEVEADDVTVLVNGAELGDSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQ
EEECCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TFNRARARVQATK
HHHHHHHEEECCC
>Mature Secondary Structure 
SLTLRVLAPDQSVFDGTAEEVILPSTTGLIGILPGHISLVTALDIGVMRVRTNGAWNSI
CEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCHHEEEHHHCEEEEEEECCCCCCEE
ALMGGFAEVEADDVTVLVNGAELGDSIDATTAEAELEQAKAKVSQMEGQEPSTEKIKAQQ
EEECCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
TFNRARARVQATK
HHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA