Click here to switch to the map view.

The map label for this gene is 124022209

Identifier: 124022209

GI number: 124022209

Start: 491885

End: 492334

Strand: Direct

Name: 124022209

Synonym: P9303_04991

Alternate gene names: NA

Gene position: 491885-492334 (Clockwise)

Preceding gene: 124022208

Following gene: 124022213

Centisome position: 18.34

GC content: 54.89

Gene sequence:

>450_bases
GTGCAACCCAAAGACGAGGGACCGAAGGAGGAGCAGGCCAAGGAGGAGCCTCAGGAAGGCCGTCCTGTGATGCGTGGTGG
CAGTGCTGCTCTAGCGACTGCAACGATCGATGCTGATGGTGTGCCTTCTGGATATACCCCAAAGGCGGATGAAGGTCGCT
TCTTGCTGAAGATTCTGTGGTTGCCAGACAACGTGGCTTTGGCTGTTGATCAAATCGTTGGCGGTGGTCCCAGCCCTCTT
ACGGCTTACTTTTTCTGGCCTCGTGAAGATGCCTGGGAAACACTTAAAGGCGAGCTAGAAGGCAAGAGCTGGATCACCGA
TAACGAGCGCGTTGAGGTGCTCAATAAGGCCACGGAAGTGATCAACTACTGGCAGGAAGAGGGCAAGGGTAAGAATCTCG
AAGAAGCCAAGCTCAAGTTCCCAGACGTCACCTTCTGCGGTACGGCCTAA

Upstream 100 bases:

>100_bases
GGTTTCCGAAGGCGCTGCCGCTGATCAAGAGGTCGCGAGCACGGACGCTGCAGTGGCTGAGGCACATCCACAGGCCACGA
CGGACGTCGTTGAGGAGCAG

Downstream 100 bases:

>100_bases
TCAAGTCAACCGAACGAATGAAGTCTGCAGACCCGCTCCGCCTTTAAGGCGGAGTTTTTTAATGGCAAGACTGAAGCGGA
GCCTTCATGGGCGAGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Ycf65-like protein [H]

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MQPKDEGPKEEQAKEEPQEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLLKILWLPDNVALAVDQIVGGGPSPL
TAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEAKLKFPDVTFCGTA

Sequences:

>Translated_149_residues
MQPKDEGPKEEQAKEEPQEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLLKILWLPDNVALAVDQIVGGGPSPL
TAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEAKLKFPDVTFCGTA
>Mature_149_residues
MQPKDEGPKEEQAKEEPQEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLLKILWLPDNVALAVDQIVGGGPSPL
TAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEVINYWQEEGKGKNLEEAKLKFPDVTFCGTA

Specific function: Probably a ribosomal protein or a ribosome-associated protein [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PSRP3/ycf65 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006924
- ProDom:   PD015453 [H]

Pfam domain/function: PF04839 PSRP-3_Ycf65 [H]

EC number: NA

Molecular weight: Translated: 16424; Mature: 16424

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKDEGPKEEQAKEEPQEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLLKILW
CCCCCCCCCHHHHHCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
LPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEV
CCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
INYWQEEGKGKNLEEAKLKFPDVTFCGTA
HHHHHHHCCCCCCHHHEECCCCEEECCCC
>Mature Secondary Structure
MQPKDEGPKEEQAKEEPQEGRPVMRGGSAALATATIDADGVPSGYTPKADEGRFLLKILW
CCCCCCCCCHHHHHCCCCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
LPDNVALAVDQIVGGGPSPLTAYFFWPREDAWETLKGELEGKSWITDNERVEVLNKATEV
CCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
INYWQEEGKGKNLEEAKLKFPDVTFCGTA
HHHHHHHCCCCCCHHHEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]