| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022207
Identifier: 124022207
GI number: 124022207
Start: 490932
End: 491675
Strand: Reverse
Name: 124022207
Synonym: P9303_04971
Alternate gene names: NA
Gene position: 491675-490932 (Counterclockwise)
Preceding gene: 124022210
Following gene: 124022204
Centisome position: 18.33
GC content: 56.72
Gene sequence:
>744_bases GTGATCCGCGATGTAGCAGCCAGCTACCGCCGCGCCATCCAGGAAACAGTGCACCATTACAGCGGCTGGCGTCCCAGCGT CGCTGAGATCGACGCACTCAAAACAGAAGGCATCTGGAATAACGACTGGGACGCCAGCCTGGAGCTCCTGGGTCGTCATC AGAAAAGCCGTAACCAAGCCCTAGAGCTACCGAGCCGCGAGCAGCTCATAGAGGTGTTTAGTCGTTTTTATTTTGGCGGT GATCCCAATGGCGACCCCAGCAATTGGCAGGGCTTTATCCGCAATGAGCCACTGCTGGTCAATCAAAGATTCTTTGAGGA GCTGAGTTCGCTCGGCTTCGCCTGGGGGTTTGTTAGCGGTGCTGAGCCTCCTTCTGCCCGCTTTGTATTGGAACAACGCT TGGGGCTCAAGCATCCAGCCTTGATCGCCATGGGCGAAGCACCTGACAAACCAGATCCCACTGGCCTGCTTCAACTAGCC AGCCAACTTGCTGGTAGGAGATTGGGTCAAGGCGTTCCAACAGTCGCCTACCTAGGCGACACGGTGGCCGATGTGCGCAC AGTGATCAATGCCCGCCAGCAACAACCCGAGCAGCAATGGATGAGCTTGGCCGTAGCGCCACCCCATTTACATGGGATCG AGCAACAAGAAGCACGCAACGCCTATGAAGATCGACTGAAGCAGGCCGGCGCCGATCACATTCTGAGCTGCACAACCGAT GCGATCGAGACCCTCAAAAACTAG
Upstream 100 bases:
>100_bases TCTGCGCTCAAGGAATCTGAACAAACAACTAACCTAACAGTCGCTCAACACTCTCTATCCACTGAACCTGCAAGGCCTGC TGCTGTTTGACATCGACGGC
Downstream 100 bases:
>100_bases TGAAGATCTCGTCTGGCCAGGTTCGGCCATCTCCTTGATCTCGCTTAGAGCTGCTAAGGAACTTGGGTGAAAGCATGGCT AATGCTTGAGCGCTGATGCC
Product: imidazoleglycerol-phosphate dehydratase
Products: 3-(imidazol-4-yl)-2-oxopropyl phosphate; H2O
Alternate protein names: HAD Superfamily Hydrolase; HAD Family Hydrolase; HAD Superfamily Phosphatase; HAD Superfamily Hydrolase TIGR
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIRDVAASYRRAIQETVHHYSGWRPSVAEIDALKTEGIWNNDWDASLELLGRHQKSRNQALELPSREQLIEVFSRFYFGG DPNGDPSNWQGFIRNEPLLVNQRFFEELSSLGFAWGFVSGAEPPSARFVLEQRLGLKHPALIAMGEAPDKPDPTGLLQLA SQLAGRRLGQGVPTVAYLGDTVADVRTVINARQQQPEQQWMSLAVAPPHLHGIEQQEARNAYEDRLKQAGADHILSCTTD AIETLKN
Sequences:
>Translated_247_residues MIRDVAASYRRAIQETVHHYSGWRPSVAEIDALKTEGIWNNDWDASLELLGRHQKSRNQALELPSREQLIEVFSRFYFGG DPNGDPSNWQGFIRNEPLLVNQRFFEELSSLGFAWGFVSGAEPPSARFVLEQRLGLKHPALIAMGEAPDKPDPTGLLQLA SQLAGRRLGQGVPTVAYLGDTVADVRTVINARQQQPEQQWMSLAVAPPHLHGIEQQEARNAYEDRLKQAGADHILSCTTD AIETLKN >Mature_247_residues MIRDVAASYRRAIQETVHHYSGWRPSVAEIDALKTEGIWNNDWDASLELLGRHQKSRNQALELPSREQLIEVFSRFYFGG DPNGDPSNWQGFIRNEPLLVNQRFFEELSSLGFAWGFVSGAEPPSARFVLEQRLGLKHPALIAMGEAPDKPDPTGLLQLA SQLAGRRLGQGVPTVAYLGDTVADVRTVINARQQQPEQQWMSLAVAPPHLHGIEQQEARNAYEDRLKQAGADHILSCTTD AIETLKN
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.19
Molecular weight: Translated: 27590; Mature: 27590
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDVAASYRRAIQETVHHYSGWRPSVAEIDALKTEGIWNNDWDASLELLGRHQKSRNQA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LELPSREQLIEVFSRFYFGGDPNGDPSNWQGFIRNEPLLVNQRFFEELSSLGFAWGFVSG HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHCCC AEPPSARFVLEQRLGLKHPALIAMGEAPDKPDPTGLLQLASQLAGRRLGQGVPTVAYLGD CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH TVADVRTVINARQQQPEQQWMSLAVAPPHLHGIEQQEARNAYEDRLKQAGADHILSCTTD HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AIETLKN HHHHHCC >Mature Secondary Structure MIRDVAASYRRAIQETVHHYSGWRPSVAEIDALKTEGIWNNDWDASLELLGRHQKSRNQA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LELPSREQLIEVFSRFYFGGDPNGDPSNWQGFIRNEPLLVNQRFFEELSSLGFAWGFVSG HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHCCC AEPPSARFVLEQRLGLKHPALIAMGEAPDKPDPTGLLQLASQLAGRRLGQGVPTVAYLGD CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH TVADVRTVINARQQQPEQQWMSLAVAPPHLHGIEQQEARNAYEDRLKQAGADHILSCTTD HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AIETLKN HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate
Specific reaction: D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA