| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022197
Identifier: 124022197
GI number: 124022197
Start: 481904
End: 483031
Strand: Direct
Name: 124022197
Synonym: P9303_04871
Alternate gene names: NA
Gene position: 481904-483031 (Clockwise)
Preceding gene: 124022196
Following gene: 124022201
Centisome position: 17.96
GC content: 58.33
Gene sequence:
>1128_bases TTGATCCCTTCTTTTCTTCTCTCTGCAAGCGTATCGATCCCGCCGCCATTGCCTACCTTGCTGGTGGTGCCTACGGGGAT TGGCTGTGAGATTGGTGGCTATGCCGGTGATGCTTTGCCTAGTGCTCGGCTGTTAGCAGCAGCTAGCGGTTGCTTGATCA CCCATCCGAATGTGATCAATGGAGCGGCGCTTTATTGGAGCGATCCGCGCATTCAATACGTCGAGGGCTACAGCTTGGAT CGTTTTGCGGCTGGTGAGCTTGGCTTGCGACCTGTGCGTCAGCAACGGATTGGTCTGTTGTTGGATGCTGGCATCGAACC GGAGTTGCGGCAGAGGCAATGGCAGGTTGCTGAGGGTTGTCGCGCCAGTCTTGGCTTGAATCTCGGGCCAGTGGTCACCA CAGACGTTCCCTTGGAGGTGCGCTTATGTGAGGGGAGTAGTGGGGCTAGTTGGGGTGAATTAGGCCAGCCCGATGCGCTG CTGCGGGCTGGCGAGCAGCTTCGCGATGCCGGTGCTAGCGCAATCGCTGTGGTTGCCCGTTTCCCGGAAGATCCTCAAAG CGAGGCTCTGAGGGCCTATCGCCAGGGCAGTGGTGTTGATGCGCTTGCCGGTGCCGAGGCGGTGATTAGCCATTTGCTGG TGCGTGAGCTCGGCTTGCCTTGCGCTCATGCGCCGGCTTTGTCTCCACTTCCATGCGATCCACTTTTGGATCCACGTGCA GCTGGAGAGGAGTTGGGTTATACATTTTTGGCCTGTGTATTGGTGGGATTAAGTCGCGCACCGGATCTTGTGCCACTCAC AACTGAAGATCCATTGCCGGCAGGAGCAGAGCTGTTGCATGCTGAGCAGCTTGGTGCCGTGGTGGCCCCGGAGGGTGCTC TTGGCGGTGAAGCGGTGTTGGCTTGCTTGGAGCGGGGTGTCCCTTTGATCACCGTGACCAACCCGAGCGTGCTGAAGGTG ACGCCAGAGGCGCTGGCAATCACATCCGGAGTGCAGAGAGCTCGTAGTTATGCGGAAGCGGCAGGATTGCTATTGGCTCT CAGGGAGGGGATTGCGAAGGACTCCCTGCAGAGGCCTTTGGATCGGTTGAGTGAGATCTCATCTAGCTCTGATACGCCAC TGTCGTGA
Upstream 100 bases:
>100_bases GCGATGGGCGATCACAGCAGTGGAATCCACTGGTGACCAGTCTCGCAAGTTGAAGATTGAGGCGGTTGTGGTTAGTTCTG ACACGTAAGGGGATGACGTT
Downstream 100 bases:
>100_bases TGCTGAGCAAAAGCGTTGCGAAGCGGTGTTTTTGAGAGCTGGTTTTGTGGTGAAGGCTGTTTAGCGTAAGCATGCCATTG GGTGCCTTGGTGGTAGTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS
Sequences:
>Translated_375_residues MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS >Mature_375_residues MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021763 [H]
Pfam domain/function: PF11805 DUF3326 [H]
EC number: NA
Molecular weight: Translated: 38898; Mature: 38898
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVIN CCCCHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCCEEECCCCCC GAALYWSDPRIQYVEGYSLDRFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGC CCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHH RASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDALLRAGEQLRDAGASAIAVVAR HHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHEEC FPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHH ACLERGVPLITVTNPSVLKVTPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPL HHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLSEISSSSDTPLS HHHHHHCCCCCCCCC >Mature Secondary Structure MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVIN CCCCHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCCEEECCCCCC GAALYWSDPRIQYVEGYSLDRFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGC CCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHH RASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDALLRAGEQLRDAGASAIAVVAR HHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHEEC FPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHH ACLERGVPLITVTNPSVLKVTPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPL HHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRLSEISSSSDTPLS HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3041005 [H]