Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022197

Identifier: 124022197

GI number: 124022197

Start: 481904

End: 483031

Strand: Direct

Name: 124022197

Synonym: P9303_04871

Alternate gene names: NA

Gene position: 481904-483031 (Clockwise)

Preceding gene: 124022196

Following gene: 124022201

Centisome position: 17.96

GC content: 58.33

Gene sequence:

>1128_bases
TTGATCCCTTCTTTTCTTCTCTCTGCAAGCGTATCGATCCCGCCGCCATTGCCTACCTTGCTGGTGGTGCCTACGGGGAT
TGGCTGTGAGATTGGTGGCTATGCCGGTGATGCTTTGCCTAGTGCTCGGCTGTTAGCAGCAGCTAGCGGTTGCTTGATCA
CCCATCCGAATGTGATCAATGGAGCGGCGCTTTATTGGAGCGATCCGCGCATTCAATACGTCGAGGGCTACAGCTTGGAT
CGTTTTGCGGCTGGTGAGCTTGGCTTGCGACCTGTGCGTCAGCAACGGATTGGTCTGTTGTTGGATGCTGGCATCGAACC
GGAGTTGCGGCAGAGGCAATGGCAGGTTGCTGAGGGTTGTCGCGCCAGTCTTGGCTTGAATCTCGGGCCAGTGGTCACCA
CAGACGTTCCCTTGGAGGTGCGCTTATGTGAGGGGAGTAGTGGGGCTAGTTGGGGTGAATTAGGCCAGCCCGATGCGCTG
CTGCGGGCTGGCGAGCAGCTTCGCGATGCCGGTGCTAGCGCAATCGCTGTGGTTGCCCGTTTCCCGGAAGATCCTCAAAG
CGAGGCTCTGAGGGCCTATCGCCAGGGCAGTGGTGTTGATGCGCTTGCCGGTGCCGAGGCGGTGATTAGCCATTTGCTGG
TGCGTGAGCTCGGCTTGCCTTGCGCTCATGCGCCGGCTTTGTCTCCACTTCCATGCGATCCACTTTTGGATCCACGTGCA
GCTGGAGAGGAGTTGGGTTATACATTTTTGGCCTGTGTATTGGTGGGATTAAGTCGCGCACCGGATCTTGTGCCACTCAC
AACTGAAGATCCATTGCCGGCAGGAGCAGAGCTGTTGCATGCTGAGCAGCTTGGTGCCGTGGTGGCCCCGGAGGGTGCTC
TTGGCGGTGAAGCGGTGTTGGCTTGCTTGGAGCGGGGTGTCCCTTTGATCACCGTGACCAACCCGAGCGTGCTGAAGGTG
ACGCCAGAGGCGCTGGCAATCACATCCGGAGTGCAGAGAGCTCGTAGTTATGCGGAAGCGGCAGGATTGCTATTGGCTCT
CAGGGAGGGGATTGCGAAGGACTCCCTGCAGAGGCCTTTGGATCGGTTGAGTGAGATCTCATCTAGCTCTGATACGCCAC
TGTCGTGA

Upstream 100 bases:

>100_bases
GCGATGGGCGATCACAGCAGTGGAATCCACTGGTGACCAGTCTCGCAAGTTGAAGATTGAGGCGGTTGTGGTTAGTTCTG
ACACGTAAGGGGATGACGTT

Downstream 100 bases:

>100_bases
TGCTGAGCAAAAGCGTTGCGAAGCGGTGTTTTTGAGAGCTGGTTTTGTGGTGAAGGCTGTTTAGCGTAAGCATGCCATTG
GGTGCCTTGGTGGTAGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD
RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL
LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA
AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV
TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS

Sequences:

>Translated_375_residues
MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD
RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL
LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA
AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV
TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS
>Mature_375_residues
MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVINGAALYWSDPRIQYVEGYSLD
RFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGCRASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDAL
LRAGEQLRDAGASAIAVVARFPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA
AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVLACLERGVPLITVTNPSVLKV
TPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPLDRLSEISSSSDTPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021763 [H]

Pfam domain/function: PF11805 DUF3326 [H]

EC number: NA

Molecular weight: Translated: 38898; Mature: 38898

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVIN
CCCCHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCCEEECCCCCC
GAALYWSDPRIQYVEGYSLDRFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGC
CCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHH
RASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDALLRAGEQLRDAGASAIAVVAR
HHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHEEC
FPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVL
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHH
ACLERGVPLITVTNPSVLKVTPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPL
HHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLSEISSSSDTPLS
HHHHHHCCCCCCCCC
>Mature Secondary Structure
MIPSFLLSASVSIPPPLPTLLVVPTGIGCEIGGYAGDALPSARLLAAASGCLITHPNVIN
CCCCHHHHCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCHHHHHHHHCCCEEECCCCCC
GAALYWSDPRIQYVEGYSLDRFAAGELGLRPVRQQRIGLLLDAGIEPELRQRQWQVAEGC
CCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCHHHHHHHHHHHHHH
RASLGLNLGPVVTTDVPLEVRLCEGSSGASWGELGQPDALLRAGEQLRDAGASAIAVVAR
HHHCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHEEHEEC
FPEDPQSEALRAYRQGSGVDALAGAEAVISHLLVRELGLPCAHAPALSPLPCDPLLDPRA
CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
AGEELGYTFLACVLVGLSRAPDLVPLTTEDPLPAGAELLHAEQLGAVVAPEGALGGEAVL
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHCCCEECCCCCCCHHHHH
ACLERGVPLITVTNPSVLKVTPEALAITSGVQRARSYAEAAGLLLALREGIAKDSLQRPL
HHHHCCCCEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRLSEISSSSDTPLS
HHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3041005 [H]