| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022062
Identifier: 124022062
GI number: 124022062
Start: 358012
End: 358434
Strand: Direct
Name: 124022062
Synonym: P9303_03521
Alternate gene names: NA
Gene position: 358012-358434 (Clockwise)
Preceding gene: 124022061
Following gene: 124022064
Centisome position: 13.35
GC content: 41.84
Gene sequence:
>423_bases ATGGCACAAGAACAACTCAAGGTATTCATTGCCAAGGTCAAAGGCGACAAATCACTCCAAGACAATCTAACTCATGGTGG TTTTCAGAGAAATGAGAAATATGAAATGAACATTCCTGCCAAGCTCCTTACATTTATTATCCTTTCTGCATGCTTAGGAG GCTGTCAATACTTCATGTCTCCCGACAAGATGGCGGAGAGTATAGAAGCAGATGAGAGGTGCTATGAGTGGAAGGAAGAA ACCAGGAGAGAGACTGAGAGGCTTGGGATGGAATATACCCTGTTTAACAGAGAATGTAAGTTGAATGAAGCCGAGACAAT GATCTTAGGCTATGAAGGTGAATACGAAACAGGCGATAATAAGCAGGACAACGTAATAAGAGAGAACTGGAAGTTAGTCA AGAGCTTTGATCTGAAGAAGTAG
Upstream 100 bases:
>100_bases TTACAGGGTAATTTTAGCATCTTAACAGACACTTCAAACTCTCAAAAGTAATCCGATGCTTGGCACACTAAACTTAAGGT AACCACCAAAGATTTAATCA
Downstream 100 bases:
>100_bases AGTTTTGCTTCCAGTAAGTTGGGGATAATTTATTGATAACATTAAGCGCATTCATGCAACACTGCTTGATGTTGACAAAG ATGGGCCGTCTACTTAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MAQEQLKVFIAKVKGDKSLQDNLTHGGFQRNEKYEMNIPAKLLTFIILSACLGGCQYFMSPDKMAESIEADERCYEWKEE TRRETERLGMEYTLFNRECKLNEAETMILGYEGEYETGDNKQDNVIRENWKLVKSFDLKK
Sequences:
>Translated_140_residues MAQEQLKVFIAKVKGDKSLQDNLTHGGFQRNEKYEMNIPAKLLTFIILSACLGGCQYFMSPDKMAESIEADERCYEWKEE TRRETERLGMEYTLFNRECKLNEAETMILGYEGEYETGDNKQDNVIRENWKLVKSFDLKK >Mature_139_residues AQEQLKVFIAKVKGDKSLQDNLTHGGFQRNEKYEMNIPAKLLTFIILSACLGGCQYFMSPDKMAESIEADERCYEWKEET RRETERLGMEYTLFNRECKLNEAETMILGYEGEYETGDNKQDNVIRENWKLVKSFDLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16426; Mature: 16295
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQEQLKVFIAKVKGDKSLQDNLTHGGFQRNEKYEMNIPAKLLTFIILSACLGGCQYFMS CCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCC PDKMAESIEADERCYEWKEETRRETERLGMEYTLFNRECKLNEAETMILGYEGEYETGDN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC KQDNVIRENWKLVKSFDLKK CCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure AQEQLKVFIAKVKGDKSLQDNLTHGGFQRNEKYEMNIPAKLLTFIILSACLGGCQYFMS CHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHCC PDKMAESIEADERCYEWKEETRRETERLGMEYTLFNRECKLNEAETMILGYEGEYETGDN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC KQDNVIRENWKLVKSFDLKK CCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA