| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022048
Identifier: 124022048
GI number: 124022048
Start: 346458
End: 347057
Strand: Direct
Name: 124022048
Synonym: P9303_03381
Alternate gene names: NA
Gene position: 346458-347057 (Clockwise)
Preceding gene: 124022047
Following gene: 124022049
Centisome position: 12.91
GC content: 53.5
Gene sequence:
>600_bases ATGGCTCGAGCCCAACGCTTACTGCCGTCTGGCTGCAGTTTCCATATCACGCTGCGATGCAATAGCAGGCAGTTCTTGAT TGCCAAAACCCTTAGGCGTGATGTGTTGTTGGCGGTACTTAAAAAGGCCAAGCAGAAATTTGCCGTGAAGGTTTATGGGC TCTGCCTGATGGCTAACCACCTTCACTTACTGCTTAAACCAGAGGATCCAAAGGATTTGCCGAGGTTGATGCACTGGTTC GCTTGGTATTCAGCCATGGCCTTGAACCGCTTGAGCGGTCGTTGTGGGCACTTCTGGGAGGCCAGGTATTTCTCAACGCC GATCCACCCCAAAGATCACCGGCGAATGCTGAATACCTTGAGGTATATCCATGCCAACCCAAAAGCGGCTGGGGTAAGGA AAGGCTTTTATGACCCCTATTCCAACTATGGCCACTACATCAGGTTGCAATCAGACGACATCAGTGAATGGAGCCCTGCC TTGTGTCCCTTGGCGTGCAGTTCATGGAAGGGGCCGAGGTGCTTGATCTGGGGCGTGATTCCGCGGGACACCTCTGCGGA ATCAGCCTGCGCAGTGCCGAAGGGGAGCAACAACACCTGA
Upstream 100 bases:
>100_bases TATGTGGGTTAGGAGTGAGCAAATAGTTAGGGGTTCTATTTCTAGTGATCAGCTATTGGTTATTCCCTTGCTGATGATCG AGCTCTGATGCCGTCAGCCC
Downstream 100 bases:
>100_bases ACTGCCGGTGTTCCCGGTCAAAGGGCAAATGCTGTCCCTGCAAGGCCCCCGGGAAGCACTTAAACGGGTGATCTTCGGCC CCGGCACCTATATGGTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MARAQRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLKKAKQKFAVKVYGLCLMANHLHLLLKPEDPKDLPRLMHWF AWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSNYGHYIRLQSDDISEWSPA LCPLACSSWKGPRCLIWGVIPRDTSAESACAVPKGSNNT
Sequences:
>Translated_199_residues MARAQRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLKKAKQKFAVKVYGLCLMANHLHLLLKPEDPKDLPRLMHWF AWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSNYGHYIRLQSDDISEWSPA LCPLACSSWKGPRCLIWGVIPRDTSAESACAVPKGSNNT >Mature_198_residues ARAQRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLKKAKQKFAVKVYGLCLMANHLHLLLKPEDPKDLPRLMHWFA WYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTLRYIHANPKAAGVRKGFYDPYSNYGHYIRLQSDDISEWSPAL CPLACSSWKGPRCLIWGVIPRDTSAESACAVPKGSNNT
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22782; Mature: 22651
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAQRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLKKAKQKFAVKVYGLCLMANH CCCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHLLLKPEDPKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCHHHHHHHHHH RYIHANPKAAGVRKGFYDPYSNYGHYIRLQSDDISEWSPALCPLACSSWKGPRCLIWGVI HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEEC PRDTSAESACAVPKGSNNT CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARAQRLLPSGCSFHITLRCNSRQFLIAKTLRRDVLLAVLKKAKQKFAVKVYGLCLMANH CCCCCCCCCCCCEEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LHLLLKPEDPKDLPRLMHWFAWYSAMALNRLSGRCGHFWEARYFSTPIHPKDHRRMLNTL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCHHHHHHHHHH RYIHANPKAAGVRKGFYDPYSNYGHYIRLQSDDISEWSPALCPLACSSWKGPRCLIWGVI HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCEEEEEEEC PRDTSAESACAVPKGSNNT CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA