| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022036
Identifier: 124022036
GI number: 124022036
Start: 335857
End: 336966
Strand: Reverse
Name: 124022036
Synonym: P9303_03251
Alternate gene names: NA
Gene position: 336966-335857 (Counterclockwise)
Preceding gene: 124022037
Following gene: 124022033
Centisome position: 12.56
GC content: 56.22
Gene sequence:
>1110_bases TTGACGACAAACCCATCCCCGAACGATCCACTGGACAAGGTTCCTAGCGACCGCCTCTGGCTGCGCTCCGAGCTCATGGG GACCCACGTGATCACCCGTGATACCGGACGTCGTCTCGGCGTCGTGGGAGAAGTCGTGGTCGACATTGATCGCCGCGAAG TGGTGGCCCTAGGCCTGCGAGACAATCCCCTCACGCGTTACCTGCCCGGCCTCCCACGTTGGATGCCACTTGATCGGATC CGTCAGGTGGGGGACGTCATCCTCGTGGATTCCTCTGACTCACTCAAAGAGGGTTTCACCCCAGATCGCTACAGCCGAGT GATCAACTGCCAAGTGATCACAGAATCTGGCCAGCAACTAGGCAGAGTCCTGGGCTTCTCCTTCGACATCGAAACAGGGG AACTCACAACCCTGGTGATTGGAGCAATCGGTGTGCCCTTATTGGGCGAAGGGGTCTTGAGTACCTGGGAGATGCCTGTA GACGAGGTGGTCAGCAGCGGCGCAGACAGGATCATTGTGTATGAAGGAGCAGAAGAGAAGCTCAAACAACTGAATAGCGG CTTCCTCGAAAAACTCGGAGTCGGCGGCCCCAGCTGGGAAGAACAGGAGCGAGAGCGCTACAGGATGAATCTTGTGCCAG TGGAAAACCAGCTCAATTCAGGACAGCCAACTGAACAGGAGCAGCGCCGGCTCCAACCTTCCACCACTCAAACCTTTGAG CCGGAAGAGGAACTTGAATACGTTGAACTGGAAGAGCGTCAACAGGAAGTCATCCCCCAACAGCGCTATCTCGACGAAAC ACCCTCAAGCTCCCCAACGCGCTACCGCAATGACAGAGAAGAAAGAATGACCTTCGAAGAACCTCCTGCCTATGAACAAA GGCCAGTCTTCGAAGAATCAGCTGCCTATGAACAAAGACGAACCTTTGAAGATCAACAACCCCAAAGACCAAGGCCAGCT TCACGTCGACCTGTTCAGAGCCTTGGTGATCCTCTTGATGTGGAGCCCCTCGACTTTTCAGGACGTGATCAAGCTGGCCG AGACCGAGATGCAGAGGTGGAGGAGCCCCCACCGCGCCGTAATGGCACCGAACTGGACGACCCTTGGTGA
Upstream 100 bases:
>100_bases GCTCACACTCAGGTCGTGGGATTACCCAATGCGGCGTGAGCTGTTTCCTCAAGCCCTTGAGTCAAAATGACTCGATTCGC CCCCTGTTGAGGGCCTGCGT
Downstream 100 bases:
>100_bases CGTTCGATTCAAATCAAACCTCTGACTGCTCCGAAAAATCAAGCGAAGCGCTGTTCACGCAGTACCTCTGACCTGTAGGA GCTGGTCCGTCGTTAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MTTNPSPNDPLDKVPSDRLWLRSELMGTHVITRDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRYLPGLPRWMPLDRI RQVGDVILVDSSDSLKEGFTPDRYSRVINCQVITESGQQLGRVLGFSFDIETGELTTLVIGAIGVPLLGEGVLSTWEMPV DEVVSSGADRIIVYEGAEEKLKQLNSGFLEKLGVGGPSWEEQERERYRMNLVPVENQLNSGQPTEQEQRRLQPSTTQTFE PEEELEYVELEERQQEVIPQQRYLDETPSSSPTRYRNDREERMTFEEPPAYEQRPVFEESAAYEQRRTFEDQQPQRPRPA SRRPVQSLGDPLDVEPLDFSGRDQAGRDRDAEVEEPPPRRNGTELDDPW
Sequences:
>Translated_369_residues MTTNPSPNDPLDKVPSDRLWLRSELMGTHVITRDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRYLPGLPRWMPLDRI RQVGDVILVDSSDSLKEGFTPDRYSRVINCQVITESGQQLGRVLGFSFDIETGELTTLVIGAIGVPLLGEGVLSTWEMPV DEVVSSGADRIIVYEGAEEKLKQLNSGFLEKLGVGGPSWEEQERERYRMNLVPVENQLNSGQPTEQEQRRLQPSTTQTFE PEEELEYVELEERQQEVIPQQRYLDETPSSSPTRYRNDREERMTFEEPPAYEQRPVFEESAAYEQRRTFEDQQPQRPRPA SRRPVQSLGDPLDVEPLDFSGRDQAGRDRDAEVEEPPPRRNGTELDDPW >Mature_368_residues TTNPSPNDPLDKVPSDRLWLRSELMGTHVITRDTGRRLGVVGEVVVDIDRREVVALGLRDNPLTRYLPGLPRWMPLDRIR QVGDVILVDSSDSLKEGFTPDRYSRVINCQVITESGQQLGRVLGFSFDIETGELTTLVIGAIGVPLLGEGVLSTWEMPVD EVVSSGADRIIVYEGAEEKLKQLNSGFLEKLGVGGPSWEEQERERYRMNLVPVENQLNSGQPTEQEQRRLQPSTTQTFEP EEELEYVELEERQQEVIPQQRYLDETPSSSPTRYRNDREERMTFEEPPAYEQRPVFEESAAYEQRRTFEDQQPQRPRPAS RRPVQSLGDPLDVEPLDFSGRDQAGRDRDAEVEEPPPRRNGTELDDPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42156; Mature: 42025
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNPSPNDPLDKVPSDRLWLRSELMGTHVITRDTGRRLGVVGEVVVDIDRREVVALGLR CCCCCCCCCCHHHCCCCHHHHHHHHHCCEEEECCCCCHHCHHHHHEEECCCCEEEEECCC DNPLTRYLPGLPRWMPLDRIRQVGDVILVDSSDSLKEGFTPDRYSRVINCQVITESGQQL CCCHHHHCCCCCCCCCHHHHHHHCCEEEECCCCHHHHCCCHHHHHEEEEEEEECCCHHHH GRVLGFSFDIETGELTTLVIGAIGVPLLGEGVLSTWEMPVDEVVSSGADRIIVYEGAEEK HHHHCCEEECCCCCHHHHHHHHHCCCHHCCHHHHHCCCCHHHHHHCCCCEEEEECCHHHH LKQLNSGFLEKLGVGGPSWEEQERERYRMNLVPVENQLNSGQPTEQEQRRLQPSTTQTFE HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCC PEEELEYVELEERQQEVIPQQRYLDETPSSSPTRYRNDREERMTFEEPPAYEQRPVFEES CHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCHHHH AAYEQRRTFEDQQPQRPRPASRRPVQSLGDPLDVEPLDFSGRDQAGRDRDAEVEEPPPRR HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGTELDDPW CCCCCCCCC >Mature Secondary Structure TTNPSPNDPLDKVPSDRLWLRSELMGTHVITRDTGRRLGVVGEVVVDIDRREVVALGLR CCCCCCCCCHHHCCCCHHHHHHHHHCCEEEECCCCCHHCHHHHHEEECCCCEEEEECCC DNPLTRYLPGLPRWMPLDRIRQVGDVILVDSSDSLKEGFTPDRYSRVINCQVITESGQQL CCCHHHHCCCCCCCCCHHHHHHHCCEEEECCCCHHHHCCCHHHHHEEEEEEEECCCHHHH GRVLGFSFDIETGELTTLVIGAIGVPLLGEGVLSTWEMPVDEVVSSGADRIIVYEGAEEK HHHHCCEEECCCCCHHHHHHHHHCCCHHCCHHHHHCCCCHHHHHHCCCCEEEEECCHHHH LKQLNSGFLEKLGVGGPSWEEQERERYRMNLVPVENQLNSGQPTEQEQRRLQPSTTQTFE HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHCCCCCCCCCC PEEELEYVELEERQQEVIPQQRYLDETPSSSPTRYRNDREERMTFEEPPAYEQRPVFEES CHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCCCHHHH AAYEQRRTFEDQQPQRPRPASRRPVQSLGDPLDVEPLDFSGRDQAGRDRDAEVEEPPPRR HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NGTELDDPW CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA