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The map label for this gene is sufD [C]

Identifier: 124022015

GI number: 124022015

Start: 318765

End: 320015

Strand: Direct

Name: sufD [C]

Synonym: P9303_03041

Alternate gene names: 124022015

Gene position: 318765-320015 (Clockwise)

Preceding gene: 124022014

Following gene: 124022016

Centisome position: 11.88

GC content: 54.44

Gene sequence:

>1251_bases
ATGGTGGAAGCCCCCATCAAGAACTCCTCAGCTCTCGATGACTGGTGTGAGCGGCTCTTGCACAGTCTTGAAGCCCCATC
AGGTCCGATGGCTGCCTGCCAGGCTCAGTCGCGCAATCACCTTGAAACCCTCTCTGCTCCTCATCGTCGACAAGAGGCAT
GGCGTTTTTGTGATCTTGCACCCATCGCTGAGCTTGAGCCTCGACAGATTTGCTCTCTAGGTGAGCCATCGGCTCCTGGT
GTTTCTGATCAGGTGACACGTCTGGTCTTAGGCACTGGGCAGGATCCTTTCGCTGGAGTGACTCTCCCGAAGGGCCTGTC
GCCGCTTAGCGATGCGGAACTCAAGCATTCTCTCGGGCACACTTTGAACCTGGCGACATCCAAAGGCCAATGGCCTGTGG
CGTTTAATCAGGCCATCGCGTCACAAGTCATTGGCTTGCGGGTTCGCGGGATAGTGGATAGCCCTCTTGAATTGGTGTGT
GATGCCGGCGCCGATCGAGGTGTTTTTGCCGTGCGTGTGCTCTTGCTCCTTGAGGAAAAGGCCAAGCTTGAGTTGCTACA
AGTTCAGCTGAGTTCAGGTGCCAATCTCACCAGCGTTTTGGTGGAAGCTCACTTGCAAAGTGAGGCCAAGTTGAGTCATG
GCCTTCTAGCTTTCGGCCATCCTCAAGCTGCGTTGTTGGCTCATCTTGCTGTTGAGCAGGAACCAAGCAGTGATGTTTCC
CTGGTGAGTGTCTGTCAAGGTTGGGGTGTGATTCGTCATGAGCCCCAATTAATTCAGTTGAATGGTGGTGCCAAGAGTCA
ATTGCGGGCCCTTCAACTGGTGCAGGCTAATCAGCTTGCTGATACTCATTCCTGCGTGCGTTTTAATGGCCCGGAAGGAA
CCTTGGATCAACTTCACAAGGTAGTTGCAGCCGGTCATGGCCGCAGTGTTTTTAACGGGGTAGTGCAGGTGCCTCGTGAG
GCGCAGCGTACCGATGCCGCTCAGCTAAGTCGTAGCTTGTTGCTCTCAGATCGGGCCCGAATTGACACCAAGCCTGAGTT
GGAAATTGTTGCTGACGATGTGAAATGCGCCCATGGGGCCACAGTGAGCCGGCTTCAGCCGGAGGCACTTTTTTATCTTC
AAAGTCGCGGCATTTCACCTGATCAAGCCGCACAGCTTTTACTGCGCGCGTTTTGTGATGAGGTGATTTGCATGCTCCCA
TCAACTGCACAGGCCTGGCGGCCGTTGACTCGATTGTTGGATGGGGTTTGA

Upstream 100 bases:

>100_bases
GGAGGATTGTGCGCTCCGGTGACAAGGCGCTGGCACTTGAATTGGAGCAACGAGGTTATGAATGGGTGGATCGTGAATTG
GATGCACTGGAGATGACCTG

Downstream 100 bases:

>100_bases
GCCGATCATGACCTCTTCCGTTAGTTCAGATCAGAGCATGCCGTTGGCGATGGCTGCTGTAGAAGCTTCAGCCAACCTGG
CAGATCTCACGCGAGCGGAT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVAFNQAIASQVIGLRVRGIVDSPLELVC
DAGADRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
AQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAQAWRPLTRLLDGV

Sequences:

>Translated_416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVAFNQAIASQVIGLRVRGIVDSPLELVC
DAGADRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
AQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAQAWRPLTRLLDGV
>Mature_416_residues
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLAPIAELEPRQICSLGEPSAPG
VSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGHTLNLATSKGQWPVAFNQAIASQVIGLRVRGIVDSPLELVC
DAGADRGVFAVRVLLLLEEKAKLELLQVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVS
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHKVVAAGHGRSVFNGVVQVPRE
AQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGATVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLP
STAQAWRPLTRLLDGV

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=433, Percent_Identity=28.4064665127021, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI87081955, Length=279, Percent_Identity=21.8637992831541, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 44732; Mature: 44732

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PIAELEPRQICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGH
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TLNLATSKGQWPVAFNQAIASQVIGLRVRGIVDSPLELVCDAGADRGVFAVRVLLLLEEK
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
AKLELLQVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHH
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK
HHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
VVAAGHGRSVFNGVVQVPREAQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGA
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCC
TVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLPSTAQAWRPLTRLLDGV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEAPIKNSSALDDWCERLLHSLEAPSGPMAACQAQSRNHLETLSAPHRRQEAWRFCDLA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PIAELEPRQICSLGEPSAPGVSDQVTRLVLGTGQDPFAGVTLPKGLSPLSDAELKHSLGH
CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
TLNLATSKGQWPVAFNQAIASQVIGLRVRGIVDSPLELVCDAGADRGVFAVRVLLLLEEK
EEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHH
AKLELLQVQLSSGANLTSVLVEAHLQSEAKLSHGLLAFGHPQAALLAHLAVEQEPSSDVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCCHH
LVSVCQGWGVIRHEPQLIQLNGGAKSQLRALQLVQANQLADTHSCVRFNGPEGTLDQLHK
HHHHHHCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
VVAAGHGRSVFNGVVQVPREAQRTDAAQLSRSLLLSDRARIDTKPELEIVADDVKCAHGA
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHCCCC
TVSRLQPEALFYLQSRGISPDQAAQLLLRAFCDEVICMLPSTAQAWRPLTRLLDGV
HHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]