| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022010
Identifier: 124022010
GI number: 124022010
Start: 313856
End: 314953
Strand: Reverse
Name: 124022010
Synonym: P9303_02991
Alternate gene names: NA
Gene position: 314953-313856 (Counterclockwise)
Preceding gene: 124022011
Following gene: 124022009
Centisome position: 11.74
GC content: 54.01
Gene sequence:
>1098_bases GTGACCCAAGCCTTATCTTCTATGGCACGTCTCACCATCCGTCAGCTCCGCCAAGTTGCCAGCGATTTGGGTGTAACCCT TTACAGCCGCAAGACCAAGGAACAATTGCTCAGCGCTATTACTGTTCGTCAGGAAAAGGAAGAAAGCAGCCGACAGGGGC GAGAAGCTGAACTCAATTCCCCATCCAGACTCAAGTCCGATACTCGAGTGGTTTTCCTACCCCGAGATCCTCAATGGGCT TATGTCTTCTGGGAAATCTCCGAAACTGATCGCAAGCGAGCCCTATCGAAAGGAGCCAACCGGCTCTGCCTACGTTTAAC CGACGTAACCGGCATCGATGACGACAAAGCACATCCCCACACACTCCAGGAAGTCTCTGTAGACAGCCACAGCAACGAAT GGTACCTACCTGTTCCAATGTCTGATAGGGACTATCGAGTTGAACTCGGCTATCGCGTCGGTACTCTCTGGATGTCCCTG GCCTTTTCCTCTATAGCCAAGGTCCCAACACTTCACCCCAGCGAGCAAATCCTCGATCAGTTTGTTCCCTTCAGCCTTGA GGGCATCACAAGCAGTCCTGCTCCCACCGCTACACAAGCACCACAGCTAGAGGATGATCCCATTGGCGACACGATTGATA GCGGGCTACACGAGCGGCTCTATCAGAGCGCCACACAACACTTCCGCAGCAGCAGGGTCGGGTCGGAAGTCTTCCAAGAA CACAACAGCTTGAATAGCGATCAACGCGGCCTGAACGAGTCAGGCGTCGGCCTTTGGGCCAGTGGTCGTAATGAATCCGG AGTGGGTGGAGTACCACCACGCCCAAAAACCTTCTGGCTTATTGCCGACGCTGAGCTGATGATCTACGGCGCAACAGATC CTTCTGCCCGCCTAACCATCGGCGGCGAAGACATTCCTCTCTCCAATGATGGAACCTTCCGAATCCAAGTTCCCTTCCGC GACGGAGAACAGGTCTATGCGATTGAGGCGACTGCGGCCGACGGTGAGCAGAAGCGCAATATCACCTTGAACTTCCAACG GAGAACACCCACCGATAACACAAACCCAGAAGACCAAGCAGTCGCAGAATGGTTTTAA
Upstream 100 bases:
>100_bases AGTGCGGTCAGTAGATGCTGACCACCAGAGTTCTAACCACCCGTAAACGACCAATTGCCCACAGAATGTGATCCCAAACA AAAACGGAGTGTTTTTAGAC
Downstream 100 bases:
>100_bases ATGAGCTCCCCAGATCATGACGACGTTGCGTAGGTTTGTCGCCATCACTCCACTCGCTGGGGCGATCATTCTCCCTCTCG TTGTACCCCTGAGCATGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTQALSSMARLTIRQLRQVASDLGVTLYSRKTKEQLLSAITVRQEKEESSRQGREAELNSPSRLKSDTRVVFLPRDPQWA YVFWEISETDRKRALSKGANRLCLRLTDVTGIDDDKAHPHTLQEVSVDSHSNEWYLPVPMSDRDYRVELGYRVGTLWMSL AFSSIAKVPTLHPSEQILDQFVPFSLEGITSSPAPTATQAPQLEDDPIGDTIDSGLHERLYQSATQHFRSSRVGSEVFQE HNSLNSDQRGLNESGVGLWASGRNESGVGGVPPRPKTFWLIADAELMIYGATDPSARLTIGGEDIPLSNDGTFRIQVPFR DGEQVYAIEATAADGEQKRNITLNFQRRTPTDNTNPEDQAVAEWF
Sequences:
>Translated_365_residues MTQALSSMARLTIRQLRQVASDLGVTLYSRKTKEQLLSAITVRQEKEESSRQGREAELNSPSRLKSDTRVVFLPRDPQWA YVFWEISETDRKRALSKGANRLCLRLTDVTGIDDDKAHPHTLQEVSVDSHSNEWYLPVPMSDRDYRVELGYRVGTLWMSL AFSSIAKVPTLHPSEQILDQFVPFSLEGITSSPAPTATQAPQLEDDPIGDTIDSGLHERLYQSATQHFRSSRVGSEVFQE HNSLNSDQRGLNESGVGLWASGRNESGVGGVPPRPKTFWLIADAELMIYGATDPSARLTIGGEDIPLSNDGTFRIQVPFR DGEQVYAIEATAADGEQKRNITLNFQRRTPTDNTNPEDQAVAEWF >Mature_364_residues TQALSSMARLTIRQLRQVASDLGVTLYSRKTKEQLLSAITVRQEKEESSRQGREAELNSPSRLKSDTRVVFLPRDPQWAY VFWEISETDRKRALSKGANRLCLRLTDVTGIDDDKAHPHTLQEVSVDSHSNEWYLPVPMSDRDYRVELGYRVGTLWMSLA FSSIAKVPTLHPSEQILDQFVPFSLEGITSSPAPTATQAPQLEDDPIGDTIDSGLHERLYQSATQHFRSSRVGSEVFQEH NSLNSDQRGLNESGVGLWASGRNESGVGGVPPRPKTFWLIADAELMIYGATDPSARLTIGGEDIPLSNDGTFRIQVPFRD GEQVYAIEATAADGEQKRNITLNFQRRTPTDNTNPEDQAVAEWF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40820; Mature: 40689
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQALSSMARLTIRQLRQVASDLGVTLYSRKTKEQLLSAITVRQEKEESSRQGREAELNS CCHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRLKSDTRVVFLPRDPQWAYVFWEISETDRKRALSKGANRLCLRLTDVTGIDDDKAHPH CHHCCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC TLQEVSVDSHSNEWYLPVPMSDRDYRVELGYRVGTLWMSLAFSSIAKVPTLHPSEQILDQ HHHHEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FVPFSLEGITSSPAPTATQAPQLEDDPIGDTIDSGLHERLYQSATQHFRSSRVGSEVFQE HCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNSLNSDQRGLNESGVGLWASGRNESGVGGVPPRPKTFWLIADAELMIYGATDPSARLTI HHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEE GGEDIPLSNDGTFRIQVPFRDGEQVYAIEATAADGEQKRNITLNFQRRTPTDNTNPEDQA CCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHH VAEWF HHHCC >Mature Secondary Structure TQALSSMARLTIRQLRQVASDLGVTLYSRKTKEQLLSAITVRQEKEESSRQGREAELNS CHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PSRLKSDTRVVFLPRDPQWAYVFWEISETDRKRALSKGANRLCLRLTDVTGIDDDKAHPH CHHCCCCCEEEEEECCCCEEEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC TLQEVSVDSHSNEWYLPVPMSDRDYRVELGYRVGTLWMSLAFSSIAKVPTLHPSEQILDQ HHHHEECCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH FVPFSLEGITSSPAPTATQAPQLEDDPIGDTIDSGLHERLYQSATQHFRSSRVGSEVFQE HCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNSLNSDQRGLNESGVGLWASGRNESGVGGVPPRPKTFWLIADAELMIYGATDPSARLTI HHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCEEEE GGEDIPLSNDGTFRIQVPFRDGEQVYAIEATAADGEQKRNITLNFQRRTPTDNTNPEDQA CCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHH VAEWF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA