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The map label for this gene is intQ [C]

Identifier: 124022001

GI number: 124022001

Start: 301016

End: 302080

Strand: Direct

Name: intQ [C]

Synonym: P9303_02901

Alternate gene names: 124022001

Gene position: 301016-302080 (Clockwise)

Preceding gene: 124021998

Following gene: 124022002

Centisome position: 11.22

GC content: 56.24

Gene sequence:

>1065_bases
ATGTTGAAGAAGCCACCCAGCGTGAGGGACAACAACGGTGCTCTCCAGGTCAGGTTGAGGCTGGATGGGCGAGACCATTT
CATCAATCGCCTAGGTCGTTTTGACGATCCAGTTGCCCAAGCCAGGGGGCAAGCCATCTGTGCTGAGATCTGGCGGGACG
CCCAGCAGGGGGATTTGGACCTGTCCCTCAATCGATACCGCCCACTGGTGGAGGATCGAGACCAGGATTTGCTCGATTCC
CTCAGGTCACTGGCAGAGGAGAAGAGGCAGGCACGTGTGACGCATGCCTATCGGGCGGTGAAGCGGTTTGGCTTGCCGAT
CAGGACAAGCGCTGAGTTTGCTCGCTTCTTGGTCTGGATGAAGAAAGAGGGGTTGGCGGCATCGACGCAATCCACGATCC
TCAGCACGATTCGGTCTGTGCAACCAGGCAATAAGGCACTGCGATTGGTCCAGGTGAAGGTGCCAGCAAGGTCAGTGCAG
GAGGAGGTGTTGAGTAGGGAAGAGATCAAGAGTGTGCTGGACGATCTCAGAAGCAATGAGCAATGGTTTTACCCCTGCTT
TGCCTTGTGGTTGAGCACTGGACTGAGGAATGCAGAAGTGATTGGTCTGACCTGGGACTGTGTGCGCCTGGATGAAGGGG
AGCTGCTGATCAGTAAAACTTTGAGGCGTGATGGCACTGCCACGCATCAAAGACTCTGGTCAGGCACCAAGACAGGTAAG
GCACGTGTGGTGCCATTGAGTCAGCAGGTCGTTGGAGTGCTCAAGCAGCACAGGAAGACCATGCAGTGCCTGGGTCTGAA
TACGAAGGATGGTTTGGTGTTTGTGACGCCAAGGACCCATGGGCATCTGTATGACTCAGGGTTAGAGAAGGTCTGGAAGC
GATCGCAGCGACGTGTGGGGCTGACTCCACGGCGTCTGTATGCCCAAAGGCACTCGTTTCTGAGCCATGCCCTTGCTCTT
GGGAATAGTCCCGCTGATTTGGCGGCAGTCGCAGGACATCGCACCGAGGAATTGCTCAGGACTTATGCGAAGCCAACGGG
ACGGGTAAAGGTGCCGACATGGTGA

Upstream 100 bases:

>100_bases
TGAGACCTCATAGGGCTAAGAAGGGCTACTGGATTTGTTGATCTGGCTTGGCTTTTGAGGGGCGTCAGCTCTAAGCCCGA
ATCCCATGCAAGGGAGAGGG

Downstream 100 bases:

>100_bases
GGCACAGCAAGCATCAGTGGATTGAGGAAAGGAGGGAGAAATTCAGATGCCCTCATTGCGGAGAAGTCGTTGCCTGCTCT
GAGGAGGGAGTCCTTGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLKKPPSVRDNNGALQVRLRLDGRDHFINRLGRFDDPVAQARGQAICAEIWRDAQQGDLDLSLNRYRPLVEDRDQDLLDS
LRSLAEEKRQARVTHAYRAVKRFGLPIRTSAEFARFLVWMKKEGLAASTQSTILSTIRSVQPGNKALRLVQVKVPARSVQ
EEVLSREEIKSVLDDLRSNEQWFYPCFALWLSTGLRNAEVIGLTWDCVRLDEGELLISKTLRRDGTATHQRLWSGTKTGK
ARVVPLSQQVVGVLKQHRKTMQCLGLNTKDGLVFVTPRTHGHLYDSGLEKVWKRSQRRVGLTPRRLYAQRHSFLSHALAL
GNSPADLAAVAGHRTEELLRTYAKPTGRVKVPTW

Sequences:

>Translated_354_residues
MLKKPPSVRDNNGALQVRLRLDGRDHFINRLGRFDDPVAQARGQAICAEIWRDAQQGDLDLSLNRYRPLVEDRDQDLLDS
LRSLAEEKRQARVTHAYRAVKRFGLPIRTSAEFARFLVWMKKEGLAASTQSTILSTIRSVQPGNKALRLVQVKVPARSVQ
EEVLSREEIKSVLDDLRSNEQWFYPCFALWLSTGLRNAEVIGLTWDCVRLDEGELLISKTLRRDGTATHQRLWSGTKTGK
ARVVPLSQQVVGVLKQHRKTMQCLGLNTKDGLVFVTPRTHGHLYDSGLEKVWKRSQRRVGLTPRRLYAQRHSFLSHALAL
GNSPADLAAVAGHRTEELLRTYAKPTGRVKVPTW
>Mature_354_residues
MLKKPPSVRDNNGALQVRLRLDGRDHFINRLGRFDDPVAQARGQAICAEIWRDAQQGDLDLSLNRYRPLVEDRDQDLLDS
LRSLAEEKRQARVTHAYRAVKRFGLPIRTSAEFARFLVWMKKEGLAASTQSTILSTIRSVQPGNKALRLVQVKVPARSVQ
EEVLSREEIKSVLDDLRSNEQWFYPCFALWLSTGLRNAEVIGLTWDCVRLDEGELLISKTLRRDGTATHQRLWSGTKTGK
ARVVPLSQQVVGVLKQHRKTMQCLGLNTKDGLVFVTPRTHGHLYDSGLEKVWKRSQRRVGLTPRRLYAQRHSFLSHALAL
GNSPADLAAVAGHRTEELLRTYAKPTGRVKVPTW

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40194; Mature: 40194

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKPPSVRDNNGALQVRLRLDGRDHFINRLGRFDDPVAQARGQAICAEIWRDAQQGDLD
CCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCCCCE
LSLNRYRPLVEDRDQDLLDSLRSLAEEKRQARVTHAYRAVKRFGLPIRTSAEFARFLVWM
EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KKEGLAASTQSTILSTIRSVQPGNKALRLVQVKVPARSVQEEVLSREEIKSVLDDLRSNE
HCCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
QWFYPCFALWLSTGLRNAEVIGLTWDCVRLDEGELLISKTLRRDGTATHQRLWSGTKTGK
CCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCC
ARVVPLSQQVVGVLKQHRKTMQCLGLNTKDGLVFVTPRTHGHLYDSGLEKVWKRSQRRVG
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
LTPRRLYAQRHSFLSHALALGNSPADLAAVAGHRTEELLRTYAKPTGRVKVPTW
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure
MLKKPPSVRDNNGALQVRLRLDGRDHFINRLGRFDDPVAQARGQAICAEIWRDAQQGDLD
CCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCHHHHHCCHHHHHHHHCCCCCCCCE
LSLNRYRPLVEDRDQDLLDSLRSLAEEKRQARVTHAYRAVKRFGLPIRTSAEFARFLVWM
EEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
KKEGLAASTQSTILSTIRSVQPGNKALRLVQVKVPARSVQEEVLSREEIKSVLDDLRSNE
HCCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
QWFYPCFALWLSTGLRNAEVIGLTWDCVRLDEGELLISKTLRRDGTATHQRLWSGTKTGK
CCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHHHHHHHCCCCHHHHHHHCCCCCCC
ARVVPLSQQVVGVLKQHRKTMQCLGLNTKDGLVFVTPRTHGHLYDSGLEKVWKRSQRRVG
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCC
LTPRRLYAQRHSFLSHALALGNSPADLAAVAGHRTEELLRTYAKPTGRVKVPTW
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA