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The map label for this gene is ybbK [C]

Identifier: 124021987

GI number: 124021987

Start: 287508

End: 288446

Strand: Reverse

Name: ybbK [C]

Synonym: P9303_02741

Alternate gene names: 124021987

Gene position: 288446-287508 (Counterclockwise)

Preceding gene: 124021989

Following gene: 124021986

Centisome position: 10.75

GC content: 46.01

Gene sequence:

>939_bases
ATGAACGGGGCCTTCTTTGGCATTCCAACACTCGTACTAATGGCACTTTTAGCCCTAAAAGGGAAAACAGTCGTCCCTGG
AGGGCAAGTCTACCTAGTAGAACGGCTAGGCAAATACAACAGACAACTAGATTCTGGAATCCACTTTGTAATTCCATTCT
TAGAAGAAGTCCCCGGTGGAGCCACCACAACATCCAAAGAAGAAATTCTTGATGTGCCTCCCCAGGAATGCTTCACGAAA
GACAATGTTTCAGTCAAGGCAGATGCAGTAGTGTACTGGCGACTCGTCGACCATGCTCGTGCATTCTATGAAATAGGAGA
GCTCAGCACAGCACTTAAAAATGTAGTCCTCACACAAATTCGTGCAGAGATAGGAAAGATAGACCTTGACGAGACATTTA
CAAACAGGCAAGAAATAAACGAAGCACTGCTTCGTGATCTCGACCAAATAACGAATCCATGGGGAGTAAAAGTAACTCGT
GTAGAGCTAAAAGACCTTACGCCGAGACAAAACGTCCTGGACGCCATGGAGCAACAAATGGCTGCAGAAAGAACCAGAAG
AGCCTTAATTCTTGAATCAGAAGGAGCAAGACAAGCTCAGGTGAATGAAGCTCAAGGCTTCGCAGAATCTAAAGTGCTTG
CAGCCAAGGCAGACAAGGAAGCGATGATTTTAAAAGCAGAAGGAGAAGCTAAACAACAAGAGCTGGTGTCGAAAGCGAAA
GCGCTATCCATCGACGAAATTGCCAAAGTTGTCGAGACTCGACAAAGTGCGTCAGAAGTAATGAGGGTACAACTTGCCAG
CGAGTGGACAGAAATGGGGCAAAAGATGCTCAATGCCCAAGGAGGCAGCGTCTTAATGGTCGATCCTCAAAGTCCGGCAT
CCTTACTTGCGGCATTACGAAATTTACAAACAGGAAACAATAACCAACCTACAGGCTGA

Upstream 100 bases:

>100_bases
GAAAAAAGAAAATAAGAAACATGAAGCCCAAGCCATGAAAAATCACCACCAACAAGCCGTTGTAACATAGAAGGGTTCAC
TCAATGAAGCAAGAATTATC

Downstream 100 bases:

>100_bases
CAACAAGTTTAGAAAGTGCGATCATATGCTATAAACCAGCCCAATTAGTAGGGCTGGTTTACTCTCAACTCAATACATCA
ACCAGAGGGCACCCTGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNGAFFGIPTLVLMALLALKGKTVVPGGQVYLVERLGKYNRQLDSGIHFVIPFLEEVPGGATTTSKEEILDVPPQECFTK
DNVSVKADAVVYWRLVDHARAFYEIGELSTALKNVVLTQIRAEIGKIDLDETFTNRQEINEALLRDLDQITNPWGVKVTR
VELKDLTPRQNVLDAMEQQMAAERTRRALILESEGARQAQVNEAQGFAESKVLAAKADKEAMILKAEGEAKQQELVSKAK
ALSIDEIAKVVETRQSASEVMRVQLASEWTEMGQKMLNAQGGSVLMVDPQSPASLLAALRNLQTGNNNQPTG

Sequences:

>Translated_312_residues
MNGAFFGIPTLVLMALLALKGKTVVPGGQVYLVERLGKYNRQLDSGIHFVIPFLEEVPGGATTTSKEEILDVPPQECFTK
DNVSVKADAVVYWRLVDHARAFYEIGELSTALKNVVLTQIRAEIGKIDLDETFTNRQEINEALLRDLDQITNPWGVKVTR
VELKDLTPRQNVLDAMEQQMAAERTRRALILESEGARQAQVNEAQGFAESKVLAAKADKEAMILKAEGEAKQQELVSKAK
ALSIDEIAKVVETRQSASEVMRVQLASEWTEMGQKMLNAQGGSVLMVDPQSPASLLAALRNLQTGNNNQPTG
>Mature_312_residues
MNGAFFGIPTLVLMALLALKGKTVVPGGQVYLVERLGKYNRQLDSGIHFVIPFLEEVPGGATTTSKEEILDVPPQECFTK
DNVSVKADAVVYWRLVDHARAFYEIGELSTALKNVVLTQIRAEIGKIDLDETFTNRQEINEALLRDLDQITNPWGVKVTR
VELKDLTPRQNVLDAMEQQMAAERTRRALILESEGARQAQVNEAQGFAESKVLAAKADKEAMILKAEGEAKQQELVSKAK
ALSIDEIAKVVETRQSASEVMRVQLASEWTEMGQKMLNAQGGSVLMVDPQSPASLLAALRNLQTGNNNQPTG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=205, Percent_Identity=34.6341463414634, Blast_Score=147, Evalue=9e-36,
Organism=Homo sapiens, GI38016911, Length=122, Percent_Identity=33.6065573770492, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI221316744, Length=96, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI21686995, Length=96, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786697, Length=293, Percent_Identity=35.8361774744027, Blast_Score=203, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI32564147, Length=231, Percent_Identity=33.7662337662338, Blast_Score=146, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17569493, Length=192, Percent_Identity=30.2083333333333, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI193209764, Length=192, Percent_Identity=30.2083333333333, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17569499, Length=159, Percent_Identity=34.5911949685535, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71987612, Length=168, Percent_Identity=31.547619047619, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25153583, Length=168, Percent_Identity=30.952380952381, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71987621, Length=168, Percent_Identity=31.547619047619, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32566490, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71989948, Length=131, Percent_Identity=29.7709923664122, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71989955, Length=131, Percent_Identity=29.7709923664122, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17569497, Length=150, Percent_Identity=29.3333333333333, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193210507, Length=130, Percent_Identity=35.3846153846154, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17570161, Length=130, Percent_Identity=35.3846153846154, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45550506, Length=290, Percent_Identity=31.7241379310345, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI45556022, Length=123, Percent_Identity=39.0243902439024, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI18860517, Length=122, Percent_Identity=34.4262295081967, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281365664, Length=121, Percent_Identity=33.8842975206612, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI62484448, Length=121, Percent_Identity=33.8842975206612, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24657857, Length=121, Percent_Identity=33.8842975206612, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI62484274, Length=121, Percent_Identity=33.8842975206612, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356845, Length=189, Percent_Identity=25.3968253968254, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281361631, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281361633, Length=196, Percent_Identity=26.0204081632653, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34287; Mature: 34287

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGAFFGIPTLVLMALLALKGKTVVPGGQVYLVERLGKYNRQLDSGIHFVIPFLEEVPGG
CCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
ATTTSKEEILDVPPQECFTKDNVSVKADAVVYWRLVDHARAFYEIGELSTALKNVVLTQI
CCCCCHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEIGKIDLDETFTNRQEINEALLRDLDQITNPWGVKVTRVELKDLTPRQNVLDAMEQQM
HHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
AAERTRRALILESEGARQAQVNEAQGFAESKVLAAKADKEAMILKAEGEAKQQELVSKAK
HHHHHHHEEEEECCCCCHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHH
ALSIDEIAKVVETRQSASEVMRVQLASEWTEMGQKMLNAQGGSVLMVDPQSPASLLAALR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
NLQTGNNNQPTG
HHCCCCCCCCCC
>Mature Secondary Structure
MNGAFFGIPTLVLMALLALKGKTVVPGGQVYLVERLGKYNRQLDSGIHFVIPFLEEVPGG
CCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
ATTTSKEEILDVPPQECFTKDNVSVKADAVVYWRLVDHARAFYEIGELSTALKNVVLTQI
CCCCCHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAEIGKIDLDETFTNRQEINEALLRDLDQITNPWGVKVTRVELKDLTPRQNVLDAMEQQM
HHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
AAERTRRALILESEGARQAQVNEAQGFAESKVLAAKADKEAMILKAEGEAKQQELVSKAK
HHHHHHHEEEEECCCCCHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHH
ALSIDEIAKVVETRQSASEVMRVQLASEWTEMGQKMLNAQGGSVLMVDPQSPASLLAALR
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
NLQTGNNNQPTG
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]