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The map label for this gene is ydiF [H]

Identifier: 124021961

GI number: 124021961

Start: 260630

End: 262354

Strand: Reverse

Name: ydiF [H]

Synonym: P9303_02481

Alternate gene names: 124021961

Gene position: 262354-260630 (Counterclockwise)

Preceding gene: 124021963

Following gene: 124021960

Centisome position: 9.78

GC content: 54.49

Gene sequence:

>1725_bases
GTGCTGCGACTTGAGCACGTCAACAAGATCTACCCCACGCATGAAGTCCTCAAGGATGTCACCTGGGAAATCAAGCCCGG
TGACCGCATCGGACTGGTAGGAGTCAATGGGGCAGGCAAGTCCACACAGCTCAAATTAATCGCGGGACTCGAAGAAGCCA
GCAGTGGCCAGATTGTGCGCCAGGGGAACCCACGCATCGCCTACTTACAACAAGAATTTGATGTTGATCCCTGCCGCACA
GTGCGAGAAGAGCTTTTTCAAGCCTTTGGCGAGGCCGCTGCCGTTGTCCATCAACAGCGACTCGTAGAAACCGCCATGGC
TACAAAGCGGGCTGCAGAAGACAGCGTTTTTCTCGACAGCCTGATCAAGGACCTAAGCCGTTTACAGAATCGCTTTGAAG
CCCTGCACGGCTATGAGCTTGAGGCTCGAATCGAAAAACTACTGCCAACACTCCACTTCACATCGGAGGGGGCCGATCAG
CGGGTAGGGGACTATTCCGGGGGATGGCAAATGCGAATTGCGCTCGGCAAGATCCTTCTTCAAGATCCTGATCTGCTACT
GCTCGACGAGCCCACAAACCATCTGGACGTGGACACCATCCAATGGTTGGAAGACTATCTGATCAAACAGACCGCCGCCA
TGGTTGTGATCAGCCACGACCGGACGTTCCTCGATCGGATCTGTACCCAAATCGTGATTACTGAGAGAGGCGTTTCGCGC
ACCTATCTCGGCAACTACACAGCCCATCTTGAGCAGAAGGCACTCGAAGAGGAAGCAACTCAAGCTGCGTTTGAACGCCA
GCAGAAAGATCTCGCCTCCCAACAGGCCTATGTCGATCGATTCAGGGCAAGTGCCACGCGAAGCACCCAAGCCAAAAGCC
GAGAGAAACTCCTCGAGAAAGTGGAGCGAATCGAAGCTCCAGTGAAGAGTGTCAGCGGCCCCAGCTTTCGCTTCCCAGAC
GCTCCACGATCCGGCCGGCAGGTGGCTGTGATCGAAGACCTCAGCCACAGCTACGGAGACAAGATTCTCTTCCTCGGCGC
CCACCTGGAGGTGGAACCCGGCGATCGGATTGCTTTCATTGGTCCCAATGGCGCAGGCAAGTCAACTCTGCTGCGTCTGA
TCATGGGTTTGGAATCTCCAGATGACGGCAAGGCCTCCCTGGGAGAACACAACGTGATGGCTGGCTATTTCGAACAAAAC
CAAGCAGAAGCTCTGGACCTGCAGAAAACTGTCATCGACACAATGTTTGAAGCTGTCCCAGACTGGACCCAAACCCAGGT
GCGCTCTCTACTCGGCAGTTTCTGCTTGAGTAATGATGCTGTTTTCAAAGACGTCGACAATCTGAGTGGTGGTGAAAAAG
CTCGATTGGCCCTGGCCCTAATGCTGGTCCAACCCTGCAATTTGCTTGTGCTAGACGAGCCAACCAACCACCTCGACATC
CCTGCCAAGCAGATGCTGGAGGACGCACTGCAGGCGTACGAAGGCGCTGCCCTGCTGGTCTCTCATGATCGCTACTTCAT
TTCCCGTGTAGCCAATCGCATCGTGGAATTACGCGATGGCGAACTGATCCTTTACCGAGGCAACTACGCTTATTTCCAGG
AAAAAAAATCAGAGGAACAAGCCGCAGCTGCTGCGGCAATGACCCTGGCAGAACAAGAAGTCAAACGCCTCGCCAATCGC
GATCGCCAAAGAAAGCGTCAAGCCAGAAAAAAAGGCGCGGCTTAA

Upstream 100 bases:

>100_bases
AATTTGTTCGAATTTCACCATGGCCGGTGATCCGGAATGGATATCCTCCAGTCTGCCCGTATGCGAAGCGGGATGATGTT
CTTGTGGTTGCTTTCCCTCG

Downstream 100 bases:

>100_bases
ACCCAAAATCTATCCGTTTGGCAAGAAAACTTTAAAGAAGGTTAGGCAGGAAGACTCATTTTCCTTGGAGTACAGCAAAT
ATGTGCATAAGCTGACTTCA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MLRLEHVNKIYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNRFEALHGYELEARIEKLLPTLHFTSEGADQ
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLIKQTAAMVVISHDRTFLDRICTQIVITERGVSR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLASQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLESPDDGKASLGEHNVMAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKDVDNLSGGEKARLALALMLVQPCNLLVLDEPTNHLDI
PAKQMLEDALQAYEGAALLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAAMTLAEQEVKRLANR
DRQRKRQARKKGAA

Sequences:

>Translated_574_residues
MLRLEHVNKIYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNRFEALHGYELEARIEKLLPTLHFTSEGADQ
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLIKQTAAMVVISHDRTFLDRICTQIVITERGVSR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLASQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLESPDDGKASLGEHNVMAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKDVDNLSGGEKARLALALMLVQPCNLLVLDEPTNHLDI
PAKQMLEDALQAYEGAALLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAAMTLAEQEVKRLANR
DRQRKRQARKKGAA
>Mature_574_residues
MLRLEHVNKIYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVRQGNPRIAYLQQEFDVDPCRT
VREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDSLIKDLSRLQNRFEALHGYELEARIEKLLPTLHFTSEGADQ
RVGDYSGGWQMRIALGKILLQDPDLLLLDEPTNHLDVDTIQWLEDYLIKQTAAMVVISHDRTFLDRICTQIVITERGVSR
TYLGNYTAHLEQKALEEEATQAAFERQQKDLASQQAYVDRFRASATRSTQAKSREKLLEKVERIEAPVKSVSGPSFRFPD
APRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFIGPNGAGKSTLLRLIMGLESPDDGKASLGEHNVMAGYFEQN
QAEALDLQKTVIDTMFEAVPDWTQTQVRSLLGSFCLSNDAVFKDVDNLSGGEKARLALALMLVQPCNLLVLDEPTNHLDI
PAKQMLEDALQAYEGAALLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQAAAAAAMTLAEQEVKRLANR
DRQRKRQARKKGAA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=535, Percent_Identity=31.214953271028, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI27881506, Length=530, Percent_Identity=33.2075471698113, Blast_Score=248, Evalue=8e-66,
Organism=Homo sapiens, GI10947137, Length=530, Percent_Identity=33.2075471698113, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI10947135, Length=504, Percent_Identity=29.5634920634921, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI69354671, Length=504, Percent_Identity=29.5634920634921, Blast_Score=178, Evalue=2e-44,
Organism=Escherichia coli, GI1789751, Length=559, Percent_Identity=36.1359570661896, Blast_Score=320, Evalue=2e-88,
Organism=Escherichia coli, GI2367384, Length=556, Percent_Identity=35.0719424460432, Blast_Score=304, Evalue=1e-83,
Organism=Escherichia coli, GI1787041, Length=551, Percent_Identity=33.5753176043557, Blast_Score=302, Evalue=4e-83,
Organism=Escherichia coli, GI1787182, Length=543, Percent_Identity=34.2541436464088, Blast_Score=254, Evalue=9e-69,
Organism=Escherichia coli, GI1789672, Length=247, Percent_Identity=28.7449392712551, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1790190, Length=584, Percent_Identity=21.4041095890411, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788165, Length=181, Percent_Identity=31.4917127071823, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082268, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1786803, Length=219, Percent_Identity=31.0502283105023, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI87081791, Length=241, Percent_Identity=28.6307053941909, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=227, Percent_Identity=26.8722466960352, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787029, Length=245, Percent_Identity=24.8979591836735, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI145693107, Length=612, Percent_Identity=21.5686274509804, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=26.6094420600858, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787089, Length=250, Percent_Identity=26.8, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788472, Length=225, Percent_Identity=23.1111111111111, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1789873, Length=220, Percent_Identity=30, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790544, Length=242, Percent_Identity=26.4462809917355, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=201, Percent_Identity=30.8457711442786, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=261, Percent_Identity=23.7547892720307, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788002, Length=197, Percent_Identity=31.4720812182741, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI48994997, Length=247, Percent_Identity=25.9109311740891, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=208, Percent_Identity=29.8076923076923, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786703, Length=227, Percent_Identity=28.1938325991189, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=25.974025974026, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788506, Length=247, Percent_Identity=26.7206477732794, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788644, Length=260, Percent_Identity=30.3846153846154, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787712, Length=224, Percent_Identity=25.8928571428571, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1788450, Length=241, Percent_Identity=25.3112033195021, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI87081834, Length=219, Percent_Identity=27.8538812785388, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=34.2857142857143, Blast_Score=255, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17559834, Length=532, Percent_Identity=29.8872180451128, Blast_Score=231, Evalue=8e-61,
Organism=Caenorhabditis elegans, GI17555318, Length=544, Percent_Identity=29.4117647058824, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17511077, Length=330, Percent_Identity=24.2424242424242, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=258, Percent_Identity=26.7441860465116, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=330, Percent_Identity=25.7575757575758, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=259, Percent_Identity=25.8687258687259, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=532, Percent_Identity=31.390977443609, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6320874, Length=549, Percent_Identity=29.8724954462659, Blast_Score=233, Evalue=9e-62,
Organism=Saccharomyces cerevisiae, GI6325030, Length=402, Percent_Identity=29.1044776119403, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324314, Length=377, Percent_Identity=29.1777188328912, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6323278, Length=380, Percent_Identity=30, Blast_Score=124, Evalue=5e-29,
Organism=Drosophila melanogaster, GI24666836, Length=535, Percent_Identity=32.5233644859813, Blast_Score=265, Evalue=8e-71,
Organism=Drosophila melanogaster, GI24642252, Length=508, Percent_Identity=32.6771653543307, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI18859989, Length=508, Percent_Identity=32.6771653543307, Blast_Score=239, Evalue=3e-63,
Organism=Drosophila melanogaster, GI24641342, Length=526, Percent_Identity=30.0380228136882, Blast_Score=229, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24659289, Length=207, Percent_Identity=29.951690821256, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 64198; Mature: 64198

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLEHVNKIYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVR
CCCHHHHHHHCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
QGNPRIAYLQQEFDVDPCRTVREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDS
CCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKDLSRLQNRFEALHGYELEARIEKLLPTLHFTSEGADQRVGDYSGGWQMRIALGKILL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
QDPDLLLLDEPTNHLDVDTIQWLEDYLIKQTAAMVVISHDRTFLDRICTQIVITERGVSR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCH
TYLGNYTAHLEQKALEEEATQAAFERQQKDLASQQAYVDRFRASATRSTQAKSREKLLEK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERIEAPVKSVSGPSFRFPDAPRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFI
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEEEEECCCCEEEEE
GPNGAGKSTLLRLIMGLESPDDGKASLGEHNVMAGYFEQNQAEALDLQKTVIDTMFEAVP
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHCC
DWTQTQVRSLLGSFCLSNDAVFKDVDNLSGGEKARLALALMLVQPCNLLVLDEPTNHLDI
CHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
PAKQMLEDALQAYEGAALLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQ
CHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHH
AAAAAAMTLAEQEVKRLANRDRQRKRQARKKGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRLEHVNKIYPTHEVLKDVTWEIKPGDRIGLVGVNGAGKSTQLKLIAGLEEASSGQIVR
CCCHHHHHHHCCHHHHHHHCCEEECCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEE
QGNPRIAYLQQEFDVDPCRTVREELFQAFGEAAAVVHQQRLVETAMATKRAAEDSVFLDS
CCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIKDLSRLQNRFEALHGYELEARIEKLLPTLHFTSEGADQRVGDYSGGWQMRIALGKILL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHH
QDPDLLLLDEPTNHLDVDTIQWLEDYLIKQTAAMVVISHDRTFLDRICTQIVITERGVSR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHCCCCCH
TYLGNYTAHLEQKALEEEATQAAFERQQKDLASQQAYVDRFRASATRSTQAKSREKLLEK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VERIEAPVKSVSGPSFRFPDAPRSGRQVAVIEDLSHSYGDKILFLGAHLEVEPGDRIAFI
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEEEEEECCCCEEEEE
GPNGAGKSTLLRLIMGLESPDDGKASLGEHNVMAGYFEQNQAEALDLQKTVIDTMFEAVP
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHCC
DWTQTQVRSLLGSFCLSNDAVFKDVDNLSGGEKARLALALMLVQPCNLLVLDEPTNHLDI
CHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
PAKQMLEDALQAYEGAALLVSHDRYFISRVANRIVELRDGELILYRGNYAYFQEKKSEEQ
CHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHEECCCCEEEEECCCHHHHHHHHHHH
AAAAAAMTLAEQEVKRLANRDRQRKRQARKKGAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]