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The map label for this gene is degQ [C]

Identifier: 124021959

GI number: 124021959

Start: 259014

End: 260201

Strand: Direct

Name: degQ [C]

Synonym: P9303_02461

Alternate gene names: 124021959

Gene position: 259014-260201 (Clockwise)

Preceding gene: 124021958

Following gene: 124021962

Centisome position: 9.66

GC content: 57.32

Gene sequence:

>1188_bases
ATGTCTGCGTTGCTTGAGGAATCCTCCGCAGAGTTGCGGTTATCCAGCCAATCTTCAGGTTTGAGCAGGGTTTTCCGTGG
TGGTCTTCTGCTTGGCACTGGATTGGTTTGTCTGCCTGTGTTGTCGGGACTTTCCCCTCAACCGCTGCAGGCGGCATCAG
CCGCGACAGCCTTATCCCGGCAGTCGTTTGTAGCGGATGCGGTGGCTCGCAGCGGCCCTGCTGTGGTGACTCTTGAGACG
AGTCGGACGGTCCGCTCTATGGGCATGGCTGGTCTGCCTCAGGGACTGTTAGCAGACCCGCTGTTCCAACATTTCTTTGG
TTTACCTGGCAGGGTCGCTCCCCGCGCGCGGATAGAACGAGGGCAGGGAAGTGGTGTGATTTTTTCGGCGGAAGGATTGG
TTCTCACCAATGCTCATGTCGTGGAGAAAACCGATCAGCTGATGGTGGGATTGCCAGATGGTCGAAGGGTGTCTGGGCGA
CTGGTTGGTCAGGACACGATTACGGATCTGGCTGTAGTGCAGTTGGATGGCTCTGGGCCTTGGCCCACAGCTCCATTGGG
AGACTCGGACCAGCTTCGGGTCGGGGATTGGGCCATAGCCGTTGGCAACCCCTTTGGCCTTGAAAATACGGTGACGTTGG
GGATCGTCAGCAACCTCAACCGCAACGTCTCTCAGCTAGGGATCTCTGGCAAGCGGTTGGATTTGATTCAGACCGATGCT
GCTATCAATCCAGGCAACTCAGGAGGACCGTTGTTGAATTCTGAGGGCAATGTGGTGGGTATCAATACACTCGTTCGCTC
TGGGCCAGGCGCTGGGCTGGGTTTTGCTATTCCTATTAATCGGGCCAGGACCATCGCCCAGCAGCTGGTGGAGCGAGGAC
GGGCCAGTCATCCGATGGTGGGAGTAGGTCTCTCGCCGGTGCCATCTGCTCGTTCTGGGGAAGCCAATTCTCCTGGTGCT
GTGATTCGTTCCGTGGTGCCGGGTGGGCCTGCAGCAAGTGCCGGTTTGAAGGTTGATGATGTGATCGTTTCGGTTGAAGG
GTTACCGATTGATGGGCCTGCTGAGGTAGTGAGCGCGATTGATCGTCATGGAGTTGGGAGTCCAATCACTCTTGGATTAA
TCCGGGGCGACAGTCGGATTGAGCTGGCGGTTACACCAGTGGAGCTGACGGCGATGCAGGCACCTTGA

Upstream 100 bases:

>100_bases
AGCTCAGGCGTATTTGGTCACAGCTCTGTCAAGGATTGACACTGTTGTTTGAGACAGCTCTGTCTACGGTCAAAGTCATC
AATTGATTGTCTTTTGGCCA

Downstream 100 bases:

>100_bases
CCCTGTGATGTGCACTACTCCCGACTAATCCAGGCTCAGGCTCTACAAAAGCATCTAAGACATGTTCAGCCCATGAGCAG
GGTAGGGATGCAATCTCATT

Product: serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSALLEESSAELRLSSQSSGLSRVFRGGLLLGTGLVCLPVLSGLSPQPLQAASAATALSRQSFVADAVARSGPAVVTLET
SRTVRSMGMAGLPQGLLADPLFQHFFGLPGRVAPRARIERGQGSGVIFSAEGLVLTNAHVVEKTDQLMVGLPDGRRVSGR
LVGQDTITDLAVVQLDGSGPWPTAPLGDSDQLRVGDWAIAVGNPFGLENTVTLGIVSNLNRNVSQLGISGKRLDLIQTDA
AINPGNSGGPLLNSEGNVVGINTLVRSGPGAGLGFAIPINRARTIAQQLVERGRASHPMVGVGLSPVPSARSGEANSPGA
VIRSVVPGGPAASAGLKVDDVIVSVEGLPIDGPAEVVSAIDRHGVGSPITLGLIRGDSRIELAVTPVELTAMQAP

Sequences:

>Translated_395_residues
MSALLEESSAELRLSSQSSGLSRVFRGGLLLGTGLVCLPVLSGLSPQPLQAASAATALSRQSFVADAVARSGPAVVTLET
SRTVRSMGMAGLPQGLLADPLFQHFFGLPGRVAPRARIERGQGSGVIFSAEGLVLTNAHVVEKTDQLMVGLPDGRRVSGR
LVGQDTITDLAVVQLDGSGPWPTAPLGDSDQLRVGDWAIAVGNPFGLENTVTLGIVSNLNRNVSQLGISGKRLDLIQTDA
AINPGNSGGPLLNSEGNVVGINTLVRSGPGAGLGFAIPINRARTIAQQLVERGRASHPMVGVGLSPVPSARSGEANSPGA
VIRSVVPGGPAASAGLKVDDVIVSVEGLPIDGPAEVVSAIDRHGVGSPITLGLIRGDSRIELAVTPVELTAMQAP
>Mature_394_residues
SALLEESSAELRLSSQSSGLSRVFRGGLLLGTGLVCLPVLSGLSPQPLQAASAATALSRQSFVADAVARSGPAVVTLETS
RTVRSMGMAGLPQGLLADPLFQHFFGLPGRVAPRARIERGQGSGVIFSAEGLVLTNAHVVEKTDQLMVGLPDGRRVSGRL
VGQDTITDLAVVQLDGSGPWPTAPLGDSDQLRVGDWAIAVGNPFGLENTVTLGIVSNLNRNVSQLGISGKRLDLIQTDAA
INPGNSGGPLLNSEGNVVGINTLVRSGPGAGLGFAIPINRARTIAQQLVERGRASHPMVGVGLSPVPSARSGEANSPGAV
IRSVVPGGPAASAGLKVDDVIVSVEGLPIDGPAEVVSAIDRHGVGSPITLGLIRGDSRIELAVTPVELTAMQAP

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=344, Percent_Identity=34.593023255814, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI24308541, Length=278, Percent_Identity=36.6906474820144, Blast_Score=162, Evalue=3e-40,
Organism=Homo sapiens, GI22129776, Length=369, Percent_Identity=32.7913279132791, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI7019477, Length=346, Percent_Identity=32.9479768786127, Blast_Score=147, Evalue=1e-35,
Organism=Escherichia coli, GI1789629, Length=321, Percent_Identity=41.7445482866044, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1786356, Length=267, Percent_Identity=41.1985018726592, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1789630, Length=281, Percent_Identity=39.1459074733096, Blast_Score=176, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24646839, Length=361, Percent_Identity=30.4709141274238, Blast_Score=147, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40255; Mature: 40123

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLEESSAELRLSSQSSGLSRVFRGGLLLGTGLVCLPVLSGLSPQPLQAASAATALSR
CCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QSFVADAVARSGPAVVTLETSRTVRSMGMAGLPQGLLADPLFQHFFGLPGRVAPRARIER
HHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC
GQGSGVIFSAEGLVLTNAHVVEKTDQLMVGLPDGRRVSGRLVGQDTITDLAVVQLDGSGP
CCCCEEEEECCCEEEECCHHEECCCCEEEECCCCCEECCEEECCCCCCEEEEEEECCCCC
WPTAPLGDSDQLRVGDWAIAVGNPFGLENTVTLGIVSNLNRNVSQLGISGKRLDLIQTDA
CCCCCCCCCCCEEECCEEEEECCCCCCCCEEEEEEHHHCCCCHHHHCCCCCEEEEEEECC
AINPGNSGGPLLNSEGNVVGINTLVRSGPGAGLGFAIPINRARTIAQQLVERGRASHPMV
CCCCCCCCCCEECCCCCEEEEHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEE
GVGLSPVPSARSGEANSPGAVIRSVVPGGPAASAGLKVDDVIVSVEGLPIDGPAEVVSAI
ECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DRHGVGSPITLGLIRGDSRIELAVTPVELTAMQAP
HHCCCCCCEEEEEEECCCEEEEEEECEEEEEECCC
>Mature Secondary Structure 
SALLEESSAELRLSSQSSGLSRVFRGGLLLGTGLVCLPVLSGLSPQPLQAASAATALSR
CCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
QSFVADAVARSGPAVVTLETSRTVRSMGMAGLPQGLLADPLFQHFFGLPGRVAPRARIER
HHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCC
GQGSGVIFSAEGLVLTNAHVVEKTDQLMVGLPDGRRVSGRLVGQDTITDLAVVQLDGSGP
CCCCEEEEECCCEEEECCHHEECCCCEEEECCCCCEECCEEECCCCCCEEEEEEECCCCC
WPTAPLGDSDQLRVGDWAIAVGNPFGLENTVTLGIVSNLNRNVSQLGISGKRLDLIQTDA
CCCCCCCCCCCEEECCEEEEECCCCCCCCEEEEEEHHHCCCCHHHHCCCCCEEEEEEECC
AINPGNSGGPLLNSEGNVVGINTLVRSGPGAGLGFAIPINRARTIAQQLVERGRASHPMV
CCCCCCCCCCEECCCCCEEEEHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCEE
GVGLSPVPSARSGEANSPGAVIRSVVPGGPAASAGLKVDDVIVSVEGLPIDGPAEVVSAI
ECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHH
DRHGVGSPITLGLIRGDSRIELAVTPVELTAMQAP
HHCCCCCCEEEEEEECCCEEEEEEECEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA