Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124021930

Identifier: 124021930

GI number: 124021930

Start: 234106

End: 235047

Strand: Direct

Name: 124021930

Synonym: P9303_02171

Alternate gene names: NA

Gene position: 234106-235047 (Clockwise)

Preceding gene: 124021927

Following gene: 124021934

Centisome position: 8.73

GC content: 54.14

Gene sequence:

>942_bases
ATGGGTTCGTCTCGCCTCACCAGCCGCCGCCGTCAGGATCAGGGGTTGAAGTGGCCTCGGATTGCGATGGCGGTGCTTGC
CACCGTTGGGTTGATCGATACAGGGTCAATCACTCTGCATCGCTGGGGATGGATTGGATCTCTCTCTTGTCCTGGGGGGA
ATGAAGGTTGCGACAAAGTTCTCAACAGCGCCTGGGGAACGCTGTTTCAGGGAGATGGCGTATCGATTCCACTTTCATTG
CTGGGCTTTTTGGCCTACCTCGCCATTTTGGTGATGGCTGTGCTGCCCTTGTTGCCAGGGCTTTCAGAGAACCGAGCAGA
CCTGTCCCGCCGCACATGGTGGGGGTTGTTTGCCTTCTCTTGCGGTATGGCCGTGTTCAGCCTGATTTTGATCGGGTTGA
TGGTGTTCAAGATCGATGCGTTTTGTTTCTTCTGCGTTCTTTCTGCTGCCCTATCCATGGGCATGTTGGTCTTGTCGTTG
ATTGGAGGAGGTTGGGATGACCCTGGAAAGTTGATTTTTCGGGGTGTTCTGCTTGCCTTGGCAGTGTTGCTCGGAGGTTT
GATTTGGTCTTCGGTTGTTGATCCGAGCCGTCCTGACGTTGGTGTAGGGGGGGTAGGGGTCCCTCCAGTTGTGAAGACGA
GGAGTACGCCATCTACGCTGGCTTTGGCTGAACATCTCAAAGAGACTGGTGCAGTGTTCTATAGCGCTTATTGGTGTCCT
CATTGCCACGAGCAGAAGGAGATGTTTGGTGAAGAGGGCGCCGCGCAACTGCAGGTCGTTGAGTGTGCGTTAGATGGTCA
GAACAGCCAAAGAGATCTGTGTGAACGCAAAGGTATTGATGCCTTCCCTACCTGGGAAATTAACGGGGAGCTCGAATCCG
GCGTGAAACCGCTCAATAAGCTTGCTGATATGAGTGGCTATCAGGGCGGGAGGCAGTTCTGA

Upstream 100 bases:

>100_bases
TTGATTTCTGGGCTGCCTAGGCAGTTCCCGCTAGGCGCCACCCTAAAGAGAGGGTGGCTTCTTCCAGAGCTGCCACAATT
CTTAGATCTGTGTAGCCGAA

Downstream 100 bases:

>100_bases
AGCAGCCAGTTAGGACCTCACTGGCCGCGTGGAGAGGTCTTCTCCTCGTTTTTGGCGTGAGTGGCGTTTCCACTGAGGCA
TTGCTGCAGGGGCATCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGSSRLTSRRRQDQGLKWPRIAMAVLATVGLIDTGSITLHRWGWIGSLSCPGGNEGCDKVLNSAWGTLFQGDGVSIPLSL
LGFLAYLAILVMAVLPLLPGLSENRADLSRRTWWGLFAFSCGMAVFSLILIGLMVFKIDAFCFFCVLSAALSMGMLVLSL
IGGGWDDPGKLIFRGVLLALAVLLGGLIWSSVVDPSRPDVGVGGVGVPPVVKTRSTPSTLALAEHLKETGAVFYSAYWCP
HCHEQKEMFGEEGAAQLQVVECALDGQNSQRDLCERKGIDAFPTWEINGELESGVKPLNKLADMSGYQGGRQF

Sequences:

>Translated_313_residues
MGSSRLTSRRRQDQGLKWPRIAMAVLATVGLIDTGSITLHRWGWIGSLSCPGGNEGCDKVLNSAWGTLFQGDGVSIPLSL
LGFLAYLAILVMAVLPLLPGLSENRADLSRRTWWGLFAFSCGMAVFSLILIGLMVFKIDAFCFFCVLSAALSMGMLVLSL
IGGGWDDPGKLIFRGVLLALAVLLGGLIWSSVVDPSRPDVGVGGVGVPPVVKTRSTPSTLALAEHLKETGAVFYSAYWCP
HCHEQKEMFGEEGAAQLQVVECALDGQNSQRDLCERKGIDAFPTWEINGELESGVKPLNKLADMSGYQGGRQF
>Mature_312_residues
GSSRLTSRRRQDQGLKWPRIAMAVLATVGLIDTGSITLHRWGWIGSLSCPGGNEGCDKVLNSAWGTLFQGDGVSIPLSLL
GFLAYLAILVMAVLPLLPGLSENRADLSRRTWWGLFAFSCGMAVFSLILIGLMVFKIDAFCFFCVLSAALSMGMLVLSLI
GGGWDDPGKLIFRGVLLALAVLLGGLIWSSVVDPSRPDVGVGGVGVPPVVKTRSTPSTLALAEHLKETGAVFYSAYWCPH
CHEQKEMFGEEGAAQLQVVECALDGQNSQRDLCERKGIDAFPTWEINGELESGVKPLNKLADMSGYQGGRQF

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33654; Mature: 33522

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSRLTSRRRQDQGLKWPRIAMAVLATVGLIDTGSITLHRWGWIGSLSCPGGNEGCDKV
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCHHHHHH
LNSAWGTLFQGDGVSIPLSLLGFLAYLAILVMAVLPLLPGLSENRADLSRRTWWGLFAFS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
CGMAVFSLILIGLMVFKIDAFCFFCVLSAALSMGMLVLSLIGGGWDDPGKLIFRGVLLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AVLLGGLIWSSVVDPSRPDVGVGGVGVPPVVKTRSTPSTLALAEHLKETGAVFYSAYWCP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
HCHEQKEMFGEEGAAQLQVVECALDGQNSQRDLCERKGIDAFPTWEINGELESGVKPLNK
CHHHHHHHHCCCCCHHEEHEEEHHCCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHHHH
LADMSGYQGGRQF
HHHHCCCCCCCCC
>Mature Secondary Structure 
GSSRLTSRRRQDQGLKWPRIAMAVLATVGLIDTGSITLHRWGWIGSLSCPGGNEGCDKV
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCHHHHHH
LNSAWGTLFQGDGVSIPLSLLGFLAYLAILVMAVLPLLPGLSENRADLSRRTWWGLFAFS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
CGMAVFSLILIGLMVFKIDAFCFFCVLSAALSMGMLVLSLIGGGWDDPGKLIFRGVLLAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AVLLGGLIWSSVVDPSRPDVGVGGVGVPPVVKTRSTPSTLALAEHLKETGAVFYSAYWCP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
HCHEQKEMFGEEGAAQLQVVECALDGQNSQRDLCERKGIDAFPTWEINGELESGVKPLNK
CHHHHHHHHCCCCCHHEEHEEEHHCCCCCHHHHHHHCCCCCCCCEEECCCHHHHHHHHHH
LADMSGYQGGRQF
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA