Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124021913

Identifier: 124021913

GI number: 124021913

Start: 219965

End: 220291

Strand: Reverse

Name: 124021913

Synonym: P9303_02001

Alternate gene names: NA

Gene position: 220291-219965 (Counterclockwise)

Preceding gene: 124021914

Following gene: 124021905

Centisome position: 8.21

GC content: 35.78

Gene sequence:

>327_bases
ATGGTCTTAACAAAGGATGGTACTCTTTCAAGTTGTGTGATCCCTACCAACTGTGTGCTTATCGAATGGAATTTTGATAA
TGTAAAGAAGTCATACGACAAGCTTATTGACATTGCAGAATCCCTACCAAGGGTAAAAGTAGTAGAAAGAACAGAAAGTT
ATTGGCATGGTATTGTACGTAGCCTAATCTTTAGGTTTCCAGATGATCTTGAGATCCTAAAAATACCAAAGAAAGGAATT
ATTCAAGTGAGGTCTGCTTCTAGACTAGGACTTGGAGATCTAGGTGTTAATAGAAACAGAATTGAAAACCTTTATTCGCA
ATTATAA

Upstream 100 bases:

>100_bases
TCGATATGATAAATTCATAAGTGATGATGTACGAGCCGATCTCTATAGGTATACATCAATCTCTTCTTAATCATCAACTC
ACATCTAACTGGAACAACTA

Downstream 100 bases:

>100_bases
ATGGTTAAAGGCTTAAATTACAACTCCAATTAACTCTTACATGAAAAGTTCTAGATCCTGAAAGGCATATATAATCATCT
CAACCTTCTAGTAGTTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI
IQVRSASRLGLGDLGVNRNRIENLYSQL

Sequences:

>Translated_108_residues
MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI
IQVRSASRLGLGDLGVNRNRIENLYSQL
>Mature_108_residues
MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI
IQVRSASRLGLGDLGVNRNRIENLYSQL

Specific function: Unknown

COG id: COG4446

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12361; Mature: 12361

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVR
CEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SLIFRFPDDLEILKIPKKGIIQVRSASRLGLGDLGVNRNRIENLYSQL
HHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVR
CEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SLIFRFPDDLEILKIPKKGIIQVRSASRLGLGDLGVNRNRIENLYSQL
HHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA