| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021913
Identifier: 124021913
GI number: 124021913
Start: 219965
End: 220291
Strand: Reverse
Name: 124021913
Synonym: P9303_02001
Alternate gene names: NA
Gene position: 220291-219965 (Counterclockwise)
Preceding gene: 124021914
Following gene: 124021905
Centisome position: 8.21
GC content: 35.78
Gene sequence:
>327_bases ATGGTCTTAACAAAGGATGGTACTCTTTCAAGTTGTGTGATCCCTACCAACTGTGTGCTTATCGAATGGAATTTTGATAA TGTAAAGAAGTCATACGACAAGCTTATTGACATTGCAGAATCCCTACCAAGGGTAAAAGTAGTAGAAAGAACAGAAAGTT ATTGGCATGGTATTGTACGTAGCCTAATCTTTAGGTTTCCAGATGATCTTGAGATCCTAAAAATACCAAAGAAAGGAATT ATTCAAGTGAGGTCTGCTTCTAGACTAGGACTTGGAGATCTAGGTGTTAATAGAAACAGAATTGAAAACCTTTATTCGCA ATTATAA
Upstream 100 bases:
>100_bases TCGATATGATAAATTCATAAGTGATGATGTACGAGCCGATCTCTATAGGTATACATCAATCTCTTCTTAATCATCAACTC ACATCTAACTGGAACAACTA
Downstream 100 bases:
>100_bases ATGGTTAAAGGCTTAAATTACAACTCCAATTAACTCTTACATGAAAAGTTCTAGATCCTGAAAGGCATATATAATCATCT CAACCTTCTAGTAGTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI IQVRSASRLGLGDLGVNRNRIENLYSQL
Sequences:
>Translated_108_residues MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI IQVRSASRLGLGDLGVNRNRIENLYSQL >Mature_108_residues MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVRSLIFRFPDDLEILKIPKKGI IQVRSASRLGLGDLGVNRNRIENLYSQL
Specific function: Unknown
COG id: COG4446
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12361; Mature: 12361
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVR CEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SLIFRFPDDLEILKIPKKGIIQVRSASRLGLGDLGVNRNRIENLYSQL HHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MVLTKDGTLSSCVIPTNCVLIEWNFDNVKKSYDKLIDIAESLPRVKVVERTESYWHGIVR CEECCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SLIFRFPDDLEILKIPKKGIIQVRSASRLGLGDLGVNRNRIENLYSQL HHHHHCCCCCEEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA