| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021902
Identifier: 124021902
GI number: 124021902
Start: 206468
End: 207649
Strand: Reverse
Name: 124021902
Synonym: P9303_01891
Alternate gene names: NA
Gene position: 207649-206468 (Counterclockwise)
Preceding gene: 124021905
Following gene: 124021901
Centisome position: 7.74
GC content: 57.53
Gene sequence:
>1182_bases ATGCTGAACCTGCTCTTGGCAGTGCGTCAGCGAAGTGAATCGCTGGTTGCACCCCTCGAACCGGAAGATCTCTGCCTTCA GGGCATGGCGGATGCAAGTCCGCCGAAATGGCACCTTGCTCACACCACCTGGTTCTTCGATACCTTTTTGCTTCAGCCCT ATCTCAAAGGCTACGAAGGCTGTGATCCACGCTGGAATTATCAATTCAACTCCTATTACGAAGCGGCCGGGGCACGCCAT CCAAGACCCTCACGGGGTGTCCTGACCCGGCCGACAATCAGGGAGATCTTCGCGTGGCGGCAACGGGTGGACGCTGCATT AACGCAACTCCTGACCTCTCCGGACGCTGACCAAGAAGACATCCAGCAACTGGCAGAACTGGGTCTACATCACGAACAGC AGCATCAGGAATTGCTGTTAATGGATCTCTTGGATGGCTTCAGCCGACAACCGTTAGAGCCTGCTTATAAAACTGGCGCC GATCATCATCTGGGACCTTTAGAGCCAACCCAGGCCCGCTGGATCTCCTGCGATGGAGGTCTCTATGAAATCGGCCATGC TGGCGCGGGATTCCATTTTGACAACGAGGGGCCGTCGCATCGCATCTGGCTGGAGGCCTTTGCCCTGATGGATCACTTGG TGTGCAACGACGACTTCAGGTGCTTTATCGCAGATGGGGGGTATCAGCGCCCAGAACTTTGGATGAGTGAGGGCTGGTCC GTACAACAACAACTGGGATGGCAGGCTCCCCGGTATTGGCGCGGCGACGGGCCTGCAGATCAATGGCAGGAAGAATTCAC CCTGGGAGGAAGGCGGCGCTTGAATCCACAAGCACCGGTGCGCCATTTGAGCTGGTTCGAAGCCGATGCCTACGCACGGT GGTGTGGTGCTCGATTACCCAGCGAAGCGGAATGGGAAGTGGCCCTACAACAGCATCAACCTCTGATCCACGATGCTCAC GGCAAGCTGTGGCAATGGACGGCAAGTCCTTATAGGCCCTATCCGGGGTTCCTTCCCGCCCCAGGCGCTGTGGGTGAATA CAACGGAAAATTCATGAGCTCCCAGTTTGTTCTTCGCGGCAGCAGCTGGCTCACACCGGAAGGCCATGGGCGCGACACCT ACCGGAACTTCTTTGCACCAGCAAACCGTTGGATGGCCGCAGGACTGCGCCTGGCCCGATGA
Upstream 100 bases:
>100_bases CCTATCAGTGCCCTTCGGTGACCAAGAGCTTTTCTATGACCAGATCCATTCGGCCGTGGTGCTTGGGCGCACAAGTGGGG ATCAGTAAAACCGTTTCCTC
Downstream 100 bases:
>100_bases GCATCGAGCTGATTGACCTACATCCCGCCCCTGCGGATCTGAAGCAGCTGGTGCAGTCAGGCTTCAAATGCCAGCCGCGG CAACTGCCAGCTTGGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWNYQFNSYYEAAGARH PRPSRGVLTRPTIREIFAWRQRVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYKTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEAFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWS VQQQLGWQAPRYWRGDGPADQWQEEFTLGGRRRLNPQAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHGRDTYRNFFAPANRWMAAGLRLAR
Sequences:
>Translated_393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWNYQFNSYYEAAGARH PRPSRGVLTRPTIREIFAWRQRVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYKTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEAFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWS VQQQLGWQAPRYWRGDGPADQWQEEFTLGGRRRLNPQAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHGRDTYRNFFAPANRWMAAGLRLAR >Mature_393_residues MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEGCDPRWNYQFNSYYEAAGARH PRPSRGVLTRPTIREIFAWRQRVDAALTQLLTSPDADQEDIQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYKTGA DHHLGPLEPTQARWISCDGGLYEIGHAGAGFHFDNEGPSHRIWLEAFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWS VQQQLGWQAPRYWRGDGPADQWQEEFTLGGRRRLNPQAPVRHLSWFEADAYARWCGARLPSEAEWEVALQQHQPLIHDAH GKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRGSSWLTPEGHGRDTYRNFFAPANRWMAAGLRLAR
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45087; Mature: 45087
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEG CCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC CDPRWNYQFNSYYEAAGARHPRPSRGVLTRPTIREIFAWRQRVDAALTQLLTSPDADQED CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYKTGADHHLGPLEPTQARWISCDGG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCC LYEIGHAGAGFHFDNEGPSHRIWLEAFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCC VQQQLGWQAPRYWRGDGPADQWQEEFTLGGRRRLNPQAPVRHLSWFEADAYARWCGARLP HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC SEAEWEVALQQHQPLIHDAHGKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRG CCCHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEC SSWLTPEGHGRDTYRNFFAPANRWMAAGLRLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNLLLAVRQRSESLVAPLEPEDLCLQGMADASPPKWHLAHTTWFFDTFLLQPYLKGYEG CCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCC CDPRWNYQFNSYYEAAGARHPRPSRGVLTRPTIREIFAWRQRVDAALTQLLTSPDADQED CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH IQQLAELGLHHEQQHQELLLMDLLDGFSRQPLEPAYKTGADHHLGPLEPTQARWISCDGG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCEEEECCCC LYEIGHAGAGFHFDNEGPSHRIWLEAFALMDHLVCNDDFRCFIADGGYQRPELWMSEGWS EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCCCC VQQQLGWQAPRYWRGDGPADQWQEEFTLGGRRRLNPQAPVRHLSWFEADAYARWCGARLP HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC SEAEWEVALQQHQPLIHDAHGKLWQWTASPYRPYPGFLPAPGAVGEYNGKFMSSQFVLRG CCCHHHHHHHHCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEC SSWLTPEGHGRDTYRNFFAPANRWMAAGLRLAR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA