| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is mreC
Identifier: 124021893
GI number: 124021893
Start: 199296
End: 200039
Strand: Direct
Name: mreC
Synonym: P9303_01801
Alternate gene names: NA
Gene position: 199296-200039 (Clockwise)
Preceding gene: 124021892
Following gene: 124021894
Centisome position: 7.43
GC content: 55.91
Gene sequence:
>744_bases ATGGGGGTTTCCCCGTGGCAGGCATCTTTCCGTTGGTGGCGTTGGCGTGGAGTTTTGCCTTGGCTGTTGTTGTTGGCAGC GCTTGGTTTGGTTCGTTGGAGTAAAGGCGCCGGTTTTGCCGATGCTTATGCCCTTCTTAGTCGGCCGTTTTGGCCTGGAT CAGCCCAGCGAGAATGGATCCAGTCTGGTATTCAGCTCGAGCAACAGAGCAAACTTCGGTTGCTTGAGCAGGACAATCAA AGACTTCGCGGGTTGCTTGCTCTTGGTCAGGCCTCAGGATCTGGGCGCATTTCCGCGGCTGTGATTTCCCGTACCCCGAA GGGGTGGTGGCAGCAACTGGAACTGGGCAAGGGGCGATTGCATGGCATTGCTCAGGGTGATGCTGTGATGGGGCCAGGAG GATTACTGGGGAGAATTCAAAGTGTCACCCCTGCCACTGCACGTGTTCAACTGCTCACTGCGCCAGGTAGTCGAGTTGGA GTTTGGATACCGCGAACCAAGCGTCATGGACTCTTGGTTGGTGTGGGTACGAGTAGGCCTCAGTTGGAGTTTCTCGATAA GAATCCCTATGCAGTGCCAGGTGATCTTGTCAGCATCTCGCCTGCCAGCACATTGTTGCCCGCCAGCCTGCCTGTAGGGG TGATTCAGAAAGTGGATGATCGAGCAGTTCCGGCTCCTCGTGCAGCTGTGCAGTTAATCGCTGCACCAGAAGCAATCGAT TGGGTGCAGGTGCAGATTCGCTGA
Upstream 100 bases:
>100_bases GTGGTCAATGGTTGTGGTCAGGTACTCGAGGATTACAAGCGACTTCGCAGGGTCCTTGATACTCCGGAATTCACTCGCTC TTCAATGACGGCTTGAATCG
Downstream 100 bases:
>100_bases TGGCGCGCCTTCATCAGCAACCGATTTGCTTGGCTTCAAGCCTCTTCGTGCCTTGGCTGACCCTCGCTGCACCGACCTGG TTGAGCCTTTCTGGGGTGGG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MGVSPWQASFRWWRWRGVLPWLLLLAALGLVRWSKGAGFADAYALLSRPFWPGSAQREWIQSGIQLEQQSKLRLLEQDNQ RLRGLLALGQASGSGRISAAVISRTPKGWWQQLELGKGRLHGIAQGDAVMGPGGLLGRIQSVTPATARVQLLTAPGSRVG VWIPRTKRHGLLVGVGTSRPQLEFLDKNPYAVPGDLVSISPASTLLPASLPVGVIQKVDDRAVPAPRAAVQLIAAPEAID WVQVQIR
Sequences:
>Translated_247_residues MGVSPWQASFRWWRWRGVLPWLLLLAALGLVRWSKGAGFADAYALLSRPFWPGSAQREWIQSGIQLEQQSKLRLLEQDNQ RLRGLLALGQASGSGRISAAVISRTPKGWWQQLELGKGRLHGIAQGDAVMGPGGLLGRIQSVTPATARVQLLTAPGSRVG VWIPRTKRHGLLVGVGTSRPQLEFLDKNPYAVPGDLVSISPASTLLPASLPVGVIQKVDDRAVPAPRAAVQLIAAPEAID WVQVQIR >Mature_246_residues GVSPWQASFRWWRWRGVLPWLLLLAALGLVRWSKGAGFADAYALLSRPFWPGSAQREWIQSGIQLEQQSKLRLLEQDNQR LRGLLALGQASGSGRISAAVISRTPKGWWQQLELGKGRLHGIAQGDAVMGPGGLLGRIQSVTPATARVQLLTAPGSRVGV WIPRTKRHGLLVGVGTSRPQLEFLDKNPYAVPGDLVSISPASTLLPASLPVGVIQKVDDRAVPAPRAAVQLIAAPEAIDW VQVQIR
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26797; Mature: 26666
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSPWQASFRWWRWRGVLPWLLLLAALGLVRWSKGAGFADAYALLSRPFWPGSAQREWI CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCCHHHHHH QSGIQLEQQSKLRLLEQDNQRLRGLLALGQASGSGRISAAVISRTPKGWWQQLELGKGRL HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCC HGIAQGDAVMGPGGLLGRIQSVTPATARVQLLTAPGSRVGVWIPRTKRHGLLVGVGTSRP CEEECCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCC QLEFLDKNPYAVPGDLVSISPASTLLPASLPVGVIQKVDDRAVPAPRAAVQLIAAPEAID CEEEECCCCCCCCCCEEEECCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHEEEECCCCCE WVQVQIR EEEEEEC >Mature Secondary Structure GVSPWQASFRWWRWRGVLPWLLLLAALGLVRWSKGAGFADAYALLSRPFWPGSAQREWI CCCCCCCCCEEEEECCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCCCHHHHHH QSGIQLEQQSKLRLLEQDNQRLRGLLALGQASGSGRISAAVISRTPKGWWQQLELGKGRL HHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCC HGIAQGDAVMGPGGLLGRIQSVTPATARVQLLTAPGSRVGVWIPRTKRHGLLVGVGTSRP CEEECCCEEECCCHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCC QLEFLDKNPYAVPGDLVSISPASTLLPASLPVGVIQKVDDRAVPAPRAAVQLIAAPEAID CEEEECCCCCCCCCCEEEECCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHEEEECCCCCE WVQVQIR EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA