Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is yjeE [C]

Identifier: 124021887

GI number: 124021887

Start: 194556

End: 195074

Strand: Reverse

Name: yjeE [C]

Synonym: P9303_01741

Alternate gene names: 124021887

Gene position: 195074-194556 (Counterclockwise)

Preceding gene: 124021889

Following gene: 124021884

Centisome position: 7.27

GC content: 54.14

Gene sequence:

>519_bases
GTGTACGGAAATCTCAGCGAAGTCGCCGAGACTTCGGGATCGCTTAGGGGGCAATCTACAGATGACTCATGGATTCTTGA
AAATCTTGATGCCACTCGATGCCTAGGAATAGTCCTTGTCCAGCGGCTACCTGCTTTATCAGTGCTGTTACTAGAAGGGC
CCCTGGGAGCGGGCAAAACCTCTCTCGTACAAGGCATTGCAACCGCTCTCGGCATCCGTGAGCCGATCACATCGCCTACA
TACGCTCTTGCTCAGCACTACCCGGACGGGAATCCTCCTCTGATCCATCTGGACCTCTACCGCTTGGAGCAACCCAGCAC
TGCCAATGAGCTATTTCTGCAAGAGGAAGAAGAAGCCCAAGCACTAGGTGCCCTCATGGCCGTGGAATGGCCTGATCGAT
TAAGCCTGAACTTGCCTGAAGCCTGGAGATTGCAATTGCAGCATCGAGCTCAAGGAGGTCGTCTGGCTCAGTTCACGTCA
CCTGCGACCGACCCCAAAAACTCCTCCACTTGCATCTGA

Upstream 100 bases:

>100_bases
CGCTAGGTCGATGTCTGCTACGACGTATTGAGGGGGGGCCTGCAACGAGGCCATTGATGTGGGCACTGCCACCATGGTTA
AAAGCTCCCTTGGGGGAATT

Downstream 100 bases:

>100_bases
GACGGCTGCGGATCGATACCACCAGCCCCTCCACAAACAAGCGCACCACAGGCTGCAGCAAAACGAACCATCTCCCGGAC
CTTGATCGAATCTCGTTGAG

Product: ATPase or kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MYGNLSEVAETSGSLRGQSTDDSWILENLDATRCLGIVLVQRLPALSVLLLEGPLGAGKTSLVQGIATALGIREPITSPT
YALAQHYPDGNPPLIHLDLYRLEQPSTANELFLQEEEEAQALGALMAVEWPDRLSLNLPEAWRLQLQHRAQGGRLAQFTS
PATDPKNSSTCI

Sequences:

>Translated_172_residues
MYGNLSEVAETSGSLRGQSTDDSWILENLDATRCLGIVLVQRLPALSVLLLEGPLGAGKTSLVQGIATALGIREPITSPT
YALAQHYPDGNPPLIHLDLYRLEQPSTANELFLQEEEEAQALGALMAVEWPDRLSLNLPEAWRLQLQHRAQGGRLAQFTS
PATDPKNSSTCI
>Mature_172_residues
MYGNLSEVAETSGSLRGQSTDDSWILENLDATRCLGIVLVQRLPALSVLLLEGPLGAGKTSLVQGIATALGIREPITSPT
YALAQHYPDGNPPLIHLDLYRLEQPSTANELFLQEEEEAQALGALMAVEWPDRLSLNLPEAWRLQLQHRAQGGRLAQFTS
PATDPKNSSTCI

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=123, Percent_Identity=35.7723577235772, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 18672; Mature: 18672

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGNLSEVAETSGSLRGQSTDDSWILENLDATRCLGIVLVQRLPALSVLLLEGPLGAGKT
CCCCHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCHH
SLVQGIATALGIREPITSPTYALAQHYPDGNPPLIHLDLYRLEQPSTANELFLQEEEEAQ
HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHCCCHHHHH
ALGALMAVEWPDRLSLNLPEAWRLQLQHRAQGGRLAQFTSPATDPKNSSTCI
HHHHHHEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MYGNLSEVAETSGSLRGQSTDDSWILENLDATRCLGIVLVQRLPALSVLLLEGPLGAGKT
CCCCHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCHH
SLVQGIATALGIREPITSPTYALAQHYPDGNPPLIHLDLYRLEQPSTANELFLQEEEEAQ
HHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHCCCHHHHH
ALGALMAVEWPDRLSLNLPEAWRLQLQHRAQGGRLAQFTSPATDPKNSSTCI
HHHHHHEECCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9794762; 11759840 [H]