| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021790
Identifier: 124021790
GI number: 124021790
Start: 74140
End: 75249
Strand: Reverse
Name: 124021790
Synonym: P9303_00751
Alternate gene names: NA
Gene position: 75249-74140 (Counterclockwise)
Preceding gene: 124021791
Following gene: 124021788
Centisome position: 2.8
GC content: 48.29
Gene sequence:
>1110_bases ATGGCAGCGAAACTCGGTACAACTAGAACATCACGACTGACTCCGGTGGACGGCGACTTCCAACAGCAATACCTGGCCGC AGAGAAGGCCTATGGGGCAGGAAATTACGAAGCAGCGCAATCAATCTGTGAACGCCTGCTAGGCCAACTAGAGCTGCAGC AGAAAGGACCTGAGCAAGAAGCAATGCTGGCCTGGAAGGCGTTTGTGGCTCTGCTAATGGGCCACGTCCAGCTCTACGGA ATAAACGATGTCCAGCAAGCCCAACACCACTACAACCTGGTTCTAGATAGCCAACCACAAGAGACTTTGAAAGAACTCGC CGAACAAGGCCTAGAACGATGCCAAGGCGAATTGCAACAGGAGCCTGCAGATACAGAAAAACATCCTCAAAGCCCTACCA CTAAACAATCCGCAAAACACAAGCCACTGGCTCTAAAAGCTGAAGTCATAGAACCACGGCAGAGCCTGATTGACGATCCC TTCCTATCTACAGAGACCCCAAACATTAATGAGGCCAACAAAGCTAAACATCCTCAATCTGATCAGCAGGCAACTCAACA AGAGACAAGGAAATTGAGCAATGAAATGTCAGGGTCTCTGGCTGATCTGGTTCGTGATCCCTTCCTATTTCCAGCCGCCC ACACTGCAGCCACAGAAGCAGATCACTCTAGATCGAAAACCAAACTGGAATCAACATTCATTGCAGATAGCATGAAGCCT ACTCAGATATCTAAGCAAAAAAACTACTCACAACAGACTGATTTTCAACAAAAGGTTCATGCGAAACAAGAACCATCGGC AACAACGAAAGCCCTAGAAATAAAATCAGATCCCAATACAGAAACCGAAATAAGGCCAACAGCGAAATCAAGAACAAACC CAATCACAAAAGAAAAACAGGACACTTTCAAGCAAGCAAGAGCGACCCCAACGGCGATCTCACATGCATCAACCAATGAC CTCATCAATAATTCATTGTTGCGCGTGACCATGCCCCCTTGCGCTGGCGTTGCCAATCAGGAGACCAGTCAATTGCAGTC AGAGAAGCGAACATCAGCAACGCTGACAGCTCGCCTCAAAAACTTCTGGATGGCCTTAAGCCGCCGCTGA
Upstream 100 bases:
>100_bases CACCAAGCCTGCCAGCAGTCCAACTTGAACAGATCAGCCAAAGCATTGGCCCAGGAAAACCACCTGGATCTCTACACCTC GCGCAGGGCTGGAAAGTCCA
Downstream 100 bases:
>100_bases GCGGCGACGGCGTGTGCGACCGGAAGGCACCTCTGCTGACTCAGGTTCAGATTGAGTCTGATCATTGGCTTGATCAGCAA CCGTCTTAGTAGTCGAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICERLLGQLELQQKGPEQEAMLAWKAFVALLMGHVQLYG INDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQQEPADTEKHPQSPTTKQSAKHKPLALKAEVIEPRQSLIDDP FLSTETPNINEANKAKHPQSDQQATQQETRKLSNEMSGSLADLVRDPFLFPAAHTAATEADHSRSKTKLESTFIADSMKP TQISKQKNYSQQTDFQQKVHAKQEPSATTKALEIKSDPNTETEIRPTAKSRTNPITKEKQDTFKQARATPTAISHASTND LINNSLLRVTMPPCAGVANQETSQLQSEKRTSATLTARLKNFWMALSRR
Sequences:
>Translated_369_residues MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICERLLGQLELQQKGPEQEAMLAWKAFVALLMGHVQLYG INDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQQEPADTEKHPQSPTTKQSAKHKPLALKAEVIEPRQSLIDDP FLSTETPNINEANKAKHPQSDQQATQQETRKLSNEMSGSLADLVRDPFLFPAAHTAATEADHSRSKTKLESTFIADSMKP TQISKQKNYSQQTDFQQKVHAKQEPSATTKALEIKSDPNTETEIRPTAKSRTNPITKEKQDTFKQARATPTAISHASTND LINNSLLRVTMPPCAGVANQETSQLQSEKRTSATLTARLKNFWMALSRR >Mature_368_residues AAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICERLLGQLELQQKGPEQEAMLAWKAFVALLMGHVQLYGI NDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQQEPADTEKHPQSPTTKQSAKHKPLALKAEVIEPRQSLIDDPF LSTETPNINEANKAKHPQSDQQATQQETRKLSNEMSGSLADLVRDPFLFPAAHTAATEADHSRSKTKLESTFIADSMKPT QISKQKNYSQQTDFQQKVHAKQEPSATTKALEIKSDPNTETEIRPTAKSRTNPITKEKQDTFKQARATPTAISHASTNDL INNSLLRVTMPPCAGVANQETSQLQSEKRTSATLTARLKNFWMALSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41042; Mature: 40911
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICERLLGQLELQQKGPEQE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AMLAWKAFVALLMGHVQLYGINDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQQ HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHC EPADTEKHPQSPTTKQSAKHKPLALKAEVIEPRQSLIDDPFLSTETPNINEANKAKHPQS CCCCCCCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCH DQQATQQETRKLSNEMSGSLADLVRDPFLFPAAHTAATEADHSRSKTKLESTFIADSMKP HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TQISKQKNYSQQTDFQQKVHAKQEPSATTKALEIKSDPNTETEIRPTAKSRTNPITKEKQ HHHHHHHCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCHHCCCCCCCHHHH DTFKQARATPTAISHASTNDLINNSLLRVTMPPCAGVANQETSQLQSEKRTSATLTARLK HHHHHHHCCCHHHHHCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NFWMALSRR HHHHHHCCC >Mature Secondary Structure AAKLGTTRTSRLTPVDGDFQQQYLAAEKAYGAGNYEAAQSICERLLGQLELQQKGPEQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH AMLAWKAFVALLMGHVQLYGINDVQQAQHHYNLVLDSQPQETLKELAEQGLERCQGELQQ HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCEEECCCHHHHHHHHHHHHHHHHHHHHHC EPADTEKHPQSPTTKQSAKHKPLALKAEVIEPRQSLIDDPFLSTETPNINEANKAKHPQS CCCCCCCCCCCCCCHHHCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCH DQQATQQETRKLSNEMSGSLADLVRDPFLFPAAHTAATEADHSRSKTKLESTFIADSMKP HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC TQISKQKNYSQQTDFQQKVHAKQEPSATTKALEIKSDPNTETEIRPTAKSRTNPITKEKQ HHHHHHHCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCCCCCCCCCHHCCCCCCCHHHH DTFKQARATPTAISHASTNDLINNSLLRVTMPPCAGVANQETSQLQSEKRTSATLTARLK HHHHHHHCCCHHHHHCCHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NFWMALSRR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA