| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021769
Identifier: 124021769
GI number: 124021769
Start: 54207
End: 54791
Strand: Direct
Name: 124021769
Synonym: P9303_00541
Alternate gene names: NA
Gene position: 54207-54791 (Clockwise)
Preceding gene: 124021764
Following gene: 124021772
Centisome position: 2.02
GC content: 52.14
Gene sequence:
>585_bases GTGGAGCCGATTGGCTTTAGCTTGTGCCCATCATCATGTTTTTCCATGCCCATCCTGCTCGCTATGGATCTCTCGATTGA CAGTGAGGTTCCCTTCGAGCTCACTATGCCCTTGGATTCCTCTCAATTGGCTGTGCCGCTGGTCGTGGAGGGTTCTGTTC AGAGATTTGATCCGGTAGCGCGCGCCGTTGATCTTGCTGAGACAATGCCTCGCCAGTGGTGTGGCACTTACAAGTCTTTT GGAGATGGCTCCAATGTTGATGTGAACTTGAATCTGGCCAAGCTGACACCGATTGGTCAGATCATTGATCTGCGCGGAGA GATGCGTCTTGGCAGCGTTACAACTCCTGTGCAGGGAAACTTGAATGCCAAGTCAGATCAGCTGGAGTTGCTACCCCTTT CAGATCAGTTGATTCCTGGAGTGGAGCCAGGTGGTTTTTTTATCGGCCTTCAGGAGTTCACAATGGTGGGTTGGCAGGCA CCTCGTCTTACCAATACGGGAGGCATGCTCGACTTAAACAGTTCCTGTTCAGTACAGGCATCAGAACCCTTATCAGAACC CTTGCCCATCCGCGGGCTCTGGTGA
Upstream 100 bases:
>100_bases GTGGAAGTTGCGTTTGCCGATTGTGAGCAGGTCAGGTGAGGAGTGCGTCAGAACCATTGGCGCTGTTGAGGTTGTTGGAA CGTCATTGCGGAGTGTCCCG
Downstream 100 bases:
>100_bases GTTTGTTGGTTGTGTTTTTGCCAATCGTTTGAGGTTTTTGCGTGCTGTCTTGTTCTTGGGATCAAGGCTCAGCACCTTTT GATACAGCTCGTAGGCCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MEPIGFSLCPSSCFSMPILLAMDLSIDSEVPFELTMPLDSSQLAVPLVVEGSVQRFDPVARAVDLAETMPRQWCGTYKSF GDGSNVDVNLNLAKLTPIGQIIDLRGEMRLGSVTTPVQGNLNAKSDQLELLPLSDQLIPGVEPGGFFIGLQEFTMVGWQA PRLTNTGGMLDLNSSCSVQASEPLSEPLPIRGLW
Sequences:
>Translated_194_residues MEPIGFSLCPSSCFSMPILLAMDLSIDSEVPFELTMPLDSSQLAVPLVVEGSVQRFDPVARAVDLAETMPRQWCGTYKSF GDGSNVDVNLNLAKLTPIGQIIDLRGEMRLGSVTTPVQGNLNAKSDQLELLPLSDQLIPGVEPGGFFIGLQEFTMVGWQA PRLTNTGGMLDLNSSCSVQASEPLSEPLPIRGLW >Mature_194_residues MEPIGFSLCPSSCFSMPILLAMDLSIDSEVPFELTMPLDSSQLAVPLVVEGSVQRFDPVARAVDLAETMPRQWCGTYKSF GDGSNVDVNLNLAKLTPIGQIIDLRGEMRLGSVTTPVQGNLNAKSDQLELLPLSDQLIPGVEPGGFFIGLQEFTMVGWQA PRLTNTGGMLDLNSSCSVQASEPLSEPLPIRGLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20910; Mature: 20910
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPIGFSLCPSSCFSMPILLAMDLSIDSEVPFELTMPLDSSQLAVPLVVEGSVQRFDPVA CCCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH RAVDLAETMPRQWCGTYKSFGDGSNVDVNLNLAKLTPIGQIIDLRGEMRLGSVTTPVQGN HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEECCCCEEECCCCCCCCCC LNAKSDQLELLPLSDQLIPGVEPGGFFIGLQEFTMVGWQAPRLTNTGGMLDLNSSCSVQA CCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHEEECCCCCCCCCCCCEEEECCCCCEEE SEPLSEPLPIRGLW CCCCCCCCCCCCCC >Mature Secondary Structure MEPIGFSLCPSSCFSMPILLAMDLSIDSEVPFELTMPLDSSQLAVPLVVEGSVQRFDPVA CCCCCCCCCCHHHHCCEEEEEEECCCCCCCCEEEECCCCCCCEEEEEEECCCCHHHHHHH RAVDLAETMPRQWCGTYKSFGDGSNVDVNLNLAKLTPIGQIIDLRGEMRLGSVTTPVQGN HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEECCCCEEECCCCCCCCCC LNAKSDQLELLPLSDQLIPGVEPGGFFIGLQEFTMVGWQAPRLTNTGGMLDLNSSCSVQA CCCCCCCEEEEECCCCCCCCCCCCCEEEEHHHHEEECCCCCCCCCCCCEEEECCCCCEEE SEPLSEPLPIRGLW CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA