| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021762
Identifier: 124021762
GI number: 124021762
Start: 47796
End: 48407
Strand: Direct
Name: 124021762
Synonym: P9303_00471
Alternate gene names: NA
Gene position: 47796-48407 (Clockwise)
Preceding gene: 124021761
Following gene: 124021763
Centisome position: 1.78
GC content: 50.98
Gene sequence:
>612_bases TTGACTGTCGCCCAACAGCAGGACATACAGCTAGACCGCCGTTTGCAACAGGACAGCATTCAGTTTGCGGGTAAGACCGT TTATATCAACCCTTTCCTGTACTGGCGACGGTTTGACAGCAATACCGATCGTTGGTTAAGGGAGCCCGGTCAGTTGGGTG AAGACCAGATCAGCCTCAATCGTGGTCGTTTTTACCCTGAGGTTGATTGGGCCCTGTTGGATGAGAGCCAAAGGGATGTC AAGGATGCTGCTGTTGAGATGTTCCTTAAAAGTTTGGAGCTGATTGGCACTTTTCACCCTGAACTTACAGCTGGTCAGTT GCTTGAGGTCGAGCGCAAGATGGCGGTCACAAAGAAGCAGTCTTTTGAGCGCTGGGTCGAGAAGTCGTTTCGCAGGCGTT TCAAACAAGAGTCTCGTGAGCGTAAGCGCTTTGCTCGTGAGCGTTTTTGGCGGTCTTGGAGGGAATGGTTCAGCTTGGAA ACAACGCATCATGCTGTGGGACCAATGGTGGCGTTATTGGTTTTGGCAGGTTTTGGGGGCTGGTCGATGGGAATGTCTCA AACGTCTTGCCCAACACTTTTGATCCCTTCCGAGCAAACTGTTGTTAGGTAG
Upstream 100 bases:
>100_bases TCATTTGCACCGATGAAGTGAAACTCGATTCTGTTGAGGTGATGAGGGACTGGTGAAGCTCAGAATGACTCGATAGCCTG GGCCACTGGCCTAGAGACTT
Downstream 100 bases:
>100_bases ATCTTTGAGGCTTGCATGGCCGACGATTCGTTCGACAGCCTTCGCCTTTCCCTGATGCAGGATGCTCTTCCTGTGGGTTT GGCGATGGTTGATCGGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MTVAQQQDIQLDRRLQQDSIQFAGKTVYINPFLYWRRFDSNTDRWLREPGQLGEDQISLNRGRFYPEVDWALLDESQRDV KDAAVEMFLKSLELIGTFHPELTAGQLLEVERKMAVTKKQSFERWVEKSFRRRFKQESRERKRFARERFWRSWREWFSLE TTHHAVGPMVALLVLAGFGGWSMGMSQTSCPTLLIPSEQTVVR
Sequences:
>Translated_203_residues MTVAQQQDIQLDRRLQQDSIQFAGKTVYINPFLYWRRFDSNTDRWLREPGQLGEDQISLNRGRFYPEVDWALLDESQRDV KDAAVEMFLKSLELIGTFHPELTAGQLLEVERKMAVTKKQSFERWVEKSFRRRFKQESRERKRFARERFWRSWREWFSLE TTHHAVGPMVALLVLAGFGGWSMGMSQTSCPTLLIPSEQTVVR >Mature_202_residues TVAQQQDIQLDRRLQQDSIQFAGKTVYINPFLYWRRFDSNTDRWLREPGQLGEDQISLNRGRFYPEVDWALLDESQRDVK DAAVEMFLKSLELIGTFHPELTAGQLLEVERKMAVTKKQSFERWVEKSFRRRFKQESRERKRFARERFWRSWREWFSLET THHAVGPMVALLVLAGFGGWSMGMSQTSCPTLLIPSEQTVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24064; Mature: 23933
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVAQQQDIQLDRRLQQDSIQFAGKTVYINPFLYWRRFDSNTDRWLREPGQLGEDQISLN CCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHEEEECCCCHHHHHHCCCCCCCCCEECC RGRFYPEVDWALLDESQRDVKDAAVEMFLKSLELIGTFHPELTAGQLLEVERKMAVTKKQ CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SFERWVEKSFRRRFKQESRERKRFARERFWRSWREWFSLETTHHAVGPMVALLVLAGFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC WSMGMSQTSCPTLLIPSEQTVVR HHCCCCCCCCCEEEECCCHHHCC >Mature Secondary Structure TVAQQQDIQLDRRLQQDSIQFAGKTVYINPFLYWRRFDSNTDRWLREPGQLGEDQISLN CCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHEEEECCCCHHHHHHCCCCCCCCCEECC RGRFYPEVDWALLDESQRDVKDAAVEMFLKSLELIGTFHPELTAGQLLEVERKMAVTKKQ CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SFERWVEKSFRRRFKQESRERKRFARERFWRSWREWFSLETTHHAVGPMVALLVLAGFGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC WSMGMSQTSCPTLLIPSEQTVVR HHCCCCCCCCCEEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA