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The map label for this gene is recN [H]

Identifier: 123969454

GI number: 123969454

Start: 1664431

End: 1666110

Strand: Reverse

Name: recN [H]

Synonym: A9601_19221

Alternate gene names: 123969454

Gene position: 1666110-1664431 (Counterclockwise)

Preceding gene: NA

Following gene: 123969453

Centisome position: 99.77

GC content: 26.43

Gene sequence:

>1680_bases
ATGTTAATACAACTAAAAATAGAAAATATTGCCTTAATAGAAATTATAGAAATTAATTTCGAAAAAGGTTTGAATATCAT
AACTGGGGATTCTGGTTCAGGAAAATCATTAATTTTGGATTCCCTAAATGCTCTCTTTGGTGGAACTAATATACCTCTAA
AACATTTAATACGTCCAGGAAAAGATTTTTGCGTTATTGAGGCGATATTTTCTTCTTCTTTTCAAATTAATAATTGGTTA
ATTAGTAATGGTTTTGAAATAACTTCTTCAGAACTACAAATTAAAAGAAAATCTTATAAAAAAAATAATAAAATCTTATC
CAAATATAGCCTTAATGATTTACCAATTAATAAACAATCATTAGAAAAACTTGGAAGATTTTTAATAGATTTTGCAGGTC
AATCTGACACTTTTATCTTTGATTCTTTAGATAAAAGAAGACTAATTATTGATGACTTATGTTCTCAAGAATTTAGAGAT
ACTAGCGAAAGGATTAAAAGTATATGGAGAGAAAGTGAAAAGCTAACAAGACTATTGAATGAAAAAATAGAATTTTCTAG
GAATCAAGAAGAAAAAAACTTGGCAATTAAACACATGTTGAAGAGTTTAGAAGAGGCTGATTTAAATTCAAGTCAAGAAA
TTTTAGAACTAGAGTTATTAGAAAATAAACTTGTAAATAATCTTGAAATTAATAATTCAATTAAATCATCATTAGAAAAT
TTAAATAATTTTAGTCATGATGAACCTTCAGTAACTTCTTTTCTAAATCAATCACTAAAGATTTTAAATAAAACAGCCGA
TTTCGATTTAAAGATTCAAAAATTCAGAGAGAAGTTATTAAATATTCATACTGATGTTGAAGATTTAATTTTTGAGCTGA
AGTCATATTTGCAAGAAATAGAAAATTATGAATCTAATCTTCCAGAAATACAAAGAAGATTATTTTTTTTAAAAAACTTA
GAGAGAACTTTTTCATTGGATTTAACTCAATTAATTGAAAAACGCGATCAATTAAAGACCTATTTTCAACAAAATGATCA
AGGTAATGAGATTTGCAGTATTAAATCTCAAATTGAGAATTTACAACATAATTTAAATTCTTTATTTGTTATTCAATCTA
CTGAAAGAAAAAAAATTGCTAAACAGTTAAAAAATTCAGTAATGTCAACTTTAGGCAATCTAGGTTTAGAAAATGCAAAT
TTTTCAATTCAATTTTCTGCATCCAAGCCTTCTGGCGATGGAATTGATGATATAAATTTTTTGTTTTCGGCTAATCCTGA
TCAGAAGCTTGCTCCATTATCAAATGTTATTTCTGGCGGAGAAATGTCAAGATTTTTATTAGCTATTAAATCTAGTATTT
CTAAACAACCTAATACTTTCTTTTTAGATGAAATTGATAGTGGTTTAAGTGGTAAATCTCTATTTTCTTTGGTTGAGCTT
ATAAAAGAAATTTCTAAAAATCAACAAGTCTTATGTATTACACATCAGCCATTTCTAGCTGCTAGGGGATCAGCTCATTT
CAAAGTTCATAAAAACGTTATTAATGGAATAACTTATACTTCAATTGCAAAACTAACTACAAAAAATCAAAGAAAAAATG
AACTAATAGAACTTATAGGTGGAGGTTCATGCGAAGTAAACGAATATGCTTCTAGACTACTTGATTGCTCAGCTGCGTAA

Upstream 100 bases:

>100_bases
ACCTCAATAAAATCAGTAAAGTCTTCTTTCATAACTTTATATATTTAAAACCTTTATTTTTTTAAAAAAGAAGTTAATTT
TTTTATATGGAAGATTTATC

Downstream 100 bases:

>100_bases
AATAGAAAAAATTCTACTATAATAACCTTTTTAAATCAAAATTTAGATTTAAACATGGTTAATAAGGTTGATAGTAGTTT
TGGAGAAGATAACTCAATCA

Product: DNA repair protein RecN, ABC transporter

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLIQLKIENIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNALFGGTNIPLKHLIRPGKDFCVIEAIFSSSFQINNWL
ISNGFEITSSELQIKRKSYKKNNKILSKYSLNDLPINKQSLEKLGRFLIDFAGQSDTFIFDSLDKRRLIIDDLCSQEFRD
TSERIKSIWRESEKLTRLLNEKIEFSRNQEEKNLAIKHMLKSLEEADLNSSQEILELELLENKLVNNLEINNSIKSSLEN
LNNFSHDEPSVTSFLNQSLKILNKTADFDLKIQKFREKLLNIHTDVEDLIFELKSYLQEIENYESNLPEIQRRLFFLKNL
ERTFSLDLTQLIEKRDQLKTYFQQNDQGNEICSIKSQIENLQHNLNSLFVIQSTERKKIAKQLKNSVMSTLGNLGLENAN
FSIQFSASKPSGDGIDDINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKQPNTFFLDEIDSGLSGKSLFSLVEL
IKEISKNQQVLCITHQPFLAARGSAHFKVHKNVINGITYTSIAKLTTKNQRKNELIELIGGGSCEVNEYASRLLDCSAA

Sequences:

>Translated_559_residues
MLIQLKIENIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNALFGGTNIPLKHLIRPGKDFCVIEAIFSSSFQINNWL
ISNGFEITSSELQIKRKSYKKNNKILSKYSLNDLPINKQSLEKLGRFLIDFAGQSDTFIFDSLDKRRLIIDDLCSQEFRD
TSERIKSIWRESEKLTRLLNEKIEFSRNQEEKNLAIKHMLKSLEEADLNSSQEILELELLENKLVNNLEINNSIKSSLEN
LNNFSHDEPSVTSFLNQSLKILNKTADFDLKIQKFREKLLNIHTDVEDLIFELKSYLQEIENYESNLPEIQRRLFFLKNL
ERTFSLDLTQLIEKRDQLKTYFQQNDQGNEICSIKSQIENLQHNLNSLFVIQSTERKKIAKQLKNSVMSTLGNLGLENAN
FSIQFSASKPSGDGIDDINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKQPNTFFLDEIDSGLSGKSLFSLVEL
IKEISKNQQVLCITHQPFLAARGSAHFKVHKNVINGITYTSIAKLTTKNQRKNELIELIGGGSCEVNEYASRLLDCSAA
>Mature_559_residues
MLIQLKIENIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNALFGGTNIPLKHLIRPGKDFCVIEAIFSSSFQINNWL
ISNGFEITSSELQIKRKSYKKNNKILSKYSLNDLPINKQSLEKLGRFLIDFAGQSDTFIFDSLDKRRLIIDDLCSQEFRD
TSERIKSIWRESEKLTRLLNEKIEFSRNQEEKNLAIKHMLKSLEEADLNSSQEILELELLENKLVNNLEINNSIKSSLEN
LNNFSHDEPSVTSFLNQSLKILNKTADFDLKIQKFREKLLNIHTDVEDLIFELKSYLQEIENYESNLPEIQRRLFFLKNL
ERTFSLDLTQLIEKRDQLKTYFQQNDQGNEICSIKSQIENLQHNLNSLFVIQSTERKKIAKQLKNSVMSTLGNLGLENAN
FSIQFSASKPSGDGIDDINFLFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKQPNTFFLDEIDSGLSGKSLFSLVEL
IKEISKNQQVLCITHQPFLAARGSAHFKVHKNVINGITYTSIAKLTTKNQRKNELIELIGGGSCEVNEYASRLLDCSAA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=562, Percent_Identity=23.8434163701068, Blast_Score=155, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63547; Mature: 63547

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLKIENIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNALFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC
KDFCVIEAIFSSSFQINNWLISNGFEITSSELQIKRKSYKKNNKILSKYSLNDLPINKQS
CCHHHHHHHHCCCEEECCEEEECCCEECCHHHHHHHHHHHHCCCEEHHCCCCCCCCCHHH
LEKLGRFLIDFAGQSDTFIFDSLDKRRLIIDDLCSQEFRDTSERIKSIWRESEKLTRLLN
HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIEFSRNQEEKNLAIKHMLKSLEEADLNSSQEILELELLENKLVNNLEINNSIKSSLEN
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LNNFSHDEPSVTSFLNQSLKILNKTADFDLKIQKFREKLLNIHTDVEDLIFELKSYLQEI
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ENYESNLPEIQRRLFFLKNLERTFSLDLTQLIEKRDQLKTYFQQNDQGNEICSIKSQIEN
HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LQHNLNSLFVIQSTERKKIAKQLKNSVMSTLGNLGLENANFSIQFSASKPSGDGIDDINF
HHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCE
LFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKQPNTFFLDEIDSGLSGKSLFSLVEL
EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHH
IKEISKNQQVLCITHQPFLAARGSAHFKVHKNVINGITYTSIAKLTTKNQRKNELIELIG
HHHHCCCCEEEEEECCCHHHCCCCCCEEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC
GGSCEVNEYASRLLDCSAA
CCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLIQLKIENIALIEIIEINFEKGLNIITGDSGSGKSLILDSLNALFGGTNIPLKHLIRPG
CEEEEEECCEEEEEEEEEEHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC
KDFCVIEAIFSSSFQINNWLISNGFEITSSELQIKRKSYKKNNKILSKYSLNDLPINKQS
CCHHHHHHHHCCCEEECCEEEECCCEECCHHHHHHHHHHHHCCCEEHHCCCCCCCCCHHH
LEKLGRFLIDFAGQSDTFIFDSLDKRRLIIDDLCSQEFRDTSERIKSIWRESEKLTRLLN
HHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIEFSRNQEEKNLAIKHMLKSLEEADLNSSQEILELELLENKLVNNLEINNSIKSSLEN
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LNNFSHDEPSVTSFLNQSLKILNKTADFDLKIQKFREKLLNIHTDVEDLIFELKSYLQEI
HHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ENYESNLPEIQRRLFFLKNLERTFSLDLTQLIEKRDQLKTYFQQNDQGNEICSIKSQIEN
HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LQHNLNSLFVIQSTERKKIAKQLKNSVMSTLGNLGLENANFSIQFSASKPSGDGIDDINF
HHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCE
LFSANPDQKLAPLSNVISGGEMSRFLLAIKSSISKQPNTFFLDEIDSGLSGKSLFSLVEL
EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHH
IKEISKNQQVLCITHQPFLAARGSAHFKVHKNVINGITYTSIAKLTTKNQRKNELIELIG
HHHHCCCCEEEEEECCCHHHCCCCCCEEEHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHC
GGSCEVNEYASRLLDCSAA
CCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]