| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is eriC [H]
Identifier: 123969443
GI number: 123969443
Start: 1650026
End: 1651384
Strand: Direct
Name: eriC [H]
Synonym: A9601_19111
Alternate gene names: 123969443
Gene position: 1650026-1651384 (Clockwise)
Preceding gene: 123969442
Following gene: 123969445
Centisome position: 98.81
GC content: 34.81
Gene sequence:
>1359_bases ATGCCAAACTTTATAAAAGATAATATTCAAAAAACAAGTAATAATTCTTCTCGTAGCATCAAAAAATTATTAAAACAAAG ATCTCTGGTTGTTGCATTTTCGCTCTTATTAACAGGTTTAGGAGCCTCAATTACAAGCATATCTTTTAAAACTGGAATCT ATTTTATTAATAATTGGAGATTAGCATTATTAGACCAATTCCCATCTATTGCGGTCTTACCTATTTTTGGAGCTCTAGGA GGAGCTATTGCAGGATATTTGATCAAAAATATAGCACCTGCTGCAAAAGGCTCAGGAGTGAGTCAAATCATGGGTTTTTT AAGACATAAAAAAGTTCCAATGAATTTAAAAGTAGGATTAGTAAAGCTAATATCAGGAATTATTGCTATTGGTAGTGGAT TCCCTTTGGGTCCAGAAGGTCCATCCGTTCAAATGGGAGGATCAGTAGCTTGGCAAATGGCCAAGTGGCTCAAAGCTCCT ACAGCTTTTAGAAGAGTAATAGTAGCAGCAGGGGGTGGTGCTGGAATAGCTGCAGTATTTAGCGCTCCATTAGGAGGGTT TGTCTATGCAATAGAAGAATTATTAAACTCTGCAAGACCAGTAATTTTGCTATTGGTAGTAATCACAACTTTCATTGCAG ATTCATCTGCTGATATTATTCAAGCCTTAGGTTTAGATCCTAAAGCAGGAGGGTTTGATTTTAACCTCGGATTTTTGATT CAAAAAGAATATGACCCATCAGTTTTTTTCTTACCTGTAGATTTTCTTTACTTAGTTTTACTAGGAATAATTATTGGAAT ATTTGCAGAATTGTACAGCAGATATGTTTTGTTGATGCAAAATCTTGGGAAAAAGTGGTATAAAAATAAATTTGTTTTAA AAATGAGTATTTGTGGGCTTATTTTAGGAAGCATGTACTCTTGTTTGCCCAGTACATTTCATAATTTAGATGAATTACAG AAAATAATAGCTGAACAAAATACAAGTAATGGAATTGCTTTATTAGCAGTTTTAGTATTATTTATCACGACAGGTTTAGC TGCAGCATCTGGAGCTCCTGGAGGATTGTTCTATCCAATGCTTACTTTAGGTGGGGCAATCGGACTAATAATGGGGAGCT GGGTGGAAATTGCGACAGGACATGCACCAAGTACATACATTTTTGCTGGAATGGGAGCTTTCGTAGCAGGATGTTCGCGA ACACCAATTACCGCAATGTTTTTAGCTTTCGCTTTAACAAAAAATTTATTAATAATGAAACCTGTGTTAATCAGCTGCAT TGCCAGTTTCTTGATAGCAAGAGCTTTTAATGAAGAATCAATTTATGAAAGACAAATACAAATAGAGTTAGAAGATTAA
Upstream 100 bases:
>100_bases TATTACTAAAAATAAAATTAATCCATATTCGGATGAACTTTATCGCTATCTTCAATTTGATGAAATACAAGATTTCAGCT TGACAAAGTAATCATGGACT
Downstream 100 bases:
>100_bases GGAACTATCTTCAATCAAAAACAGCAGTTTTACTATTATAAACAATTACTTGATGATTCAGATGTAATCTAACTGCTCTT GCTAGAGCAATTCTTTCAAT
Product: putative chloride channel
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVAFSLLLTGLGASITSISFKTGIYFINNWRLALLDQFPSIAVLPIFGALG GAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAP TAFRRVIVAAGGGAGIAAVFSAPLGGFVYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI QKEYDPSVFFLPVDFLYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGLILGSMYSCLPSTFHNLDELQ KIIAEQNTSNGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGAIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSR TPITAMFLAFALTKNLLIMKPVLISCIASFLIARAFNEESIYERQIQIELED
Sequences:
>Translated_452_residues MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVAFSLLLTGLGASITSISFKTGIYFINNWRLALLDQFPSIAVLPIFGALG GAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAP TAFRRVIVAAGGGAGIAAVFSAPLGGFVYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI QKEYDPSVFFLPVDFLYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGLILGSMYSCLPSTFHNLDELQ KIIAEQNTSNGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGAIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSR TPITAMFLAFALTKNLLIMKPVLISCIASFLIARAFNEESIYERQIQIELED >Mature_451_residues PNFIKDNIQKTSNNSSRSIKKLLKQRSLVVAFSLLLTGLGASITSISFKTGIYFINNWRLALLDQFPSIAVLPIFGALGG AIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGLVKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPT AFRRVIVAAGGGAGIAAVFSAPLGGFVYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLIQ KEYDPSVFFLPVDFLYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGLILGSMYSCLPSTFHNLDELQK IIAEQNTSNGIALLAVLVLFITTGLAAASGAPGGLFYPMLTLGGAIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRT PITAMFLAFALTKNLLIMKPVLISCIASFLIARAFNEESIYERQIQIELED
Specific function: Proton-coupled chloride transporter. Functions as antiport system and exchanges two chloride ions for 1 proton. Probably acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation, as part of the extreme
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=434, Percent_Identity=29.9539170506912, Blast_Score=115, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71985148, Length=521, Percent_Identity=24.1842610364683, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71985141, Length=304, Percent_Identity=27.3026315789474, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322500, Length=394, Percent_Identity=25.1269035532995, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573073, Length=400, Percent_Identity=23.25, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI161078208, Length=400, Percent_Identity=23.25, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI281361606, Length=400, Percent_Identity=23.25, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573075, Length=400, Percent_Identity=23.25, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573071, Length=400, Percent_Identity=23.25, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI281361608, Length=400, Percent_Identity=23.25, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 48320; Mature: 48189
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNFIKDNIQKTSNNSSRSIKKLLKQRSLVVAFSLLLTGLGASITSISFKTGIYFINNWR CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCEEEEECCE LALLDQFPSIAVLPIFGALGGAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGL EHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPTAFRRVIVAAGGGAGIAAVF HHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCHHHHHHHHEECCCCCHHHHHH SAPLGGFVYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEE QKEYDPSVFFLPVDFLYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGL EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH ILGSMYSCLPSTFHNLDELQKIIAEQNTSNGIALLAVLVLFITTGLAAASGAPGGLFYPM HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LTLGGAIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRTPITAMFLAFALTKNLLIMK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH PVLISCIASFLIARAFNEESIYERQIQIELED HHHHHHHHHHHHHHHCCHHHHEEEEEEEEECC >Mature Secondary Structure PNFIKDNIQKTSNNSSRSIKKLLKQRSLVVAFSLLLTGLGASITSISFKTGIYFINNWR CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCEEEEECCE LALLDQFPSIAVLPIFGALGGAIAGYLIKNIAPAAKGSGVSQIMGFLRHKKVPMNLKVGL EHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHH VKLISGIIAIGSGFPLGPEGPSVQMGGSVAWQMAKWLKAPTAFRRVIVAAGGGAGIAAVF HHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCHHHHHHHHEECCCCCHHHHHH SAPLGGFVYAIEELLNSARPVILLLVVITTFIADSSADIIQALGLDPKAGGFDFNLGFLI HCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEE QKEYDPSVFFLPVDFLYLVLLGIIIGIFAELYSRYVLLMQNLGKKWYKNKFVLKMSICGL EECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH ILGSMYSCLPSTFHNLDELQKIIAEQNTSNGIALLAVLVLFITTGLAAASGAPGGLFYPM HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LTLGGAIGLIMGSWVEIATGHAPSTYIFAGMGAFVAGCSRTPITAMFLAFALTKNLLIMK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHH PVLISCIASFLIARAFNEESIYERQIQIELED HHHHHHHHHHHHHHHCCHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA