Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123969375

Identifier: 123969375

GI number: 123969375

Start: 1572951

End: 1573280

Strand: Reverse

Name: 123969375

Synonym: A9601_18431

Alternate gene names: NA

Gene position: 1573280-1572951 (Counterclockwise)

Preceding gene: 123969376

Following gene: 123969374

Centisome position: 94.21

GC content: 28.48

Gene sequence:

>330_bases
ATGATTAATAATGTTCTCAAGAATTTTTGTTTAATTACTTTTGCATTAATTGCTCCAATTACATTACCTGCTGGTGGGAT
CCAAAGAAGTTTAAATCAAAATAAGTTCCCTAATAATACAAATGAAATTATATTGAGTTCCAAGGCTTCTCTTTATTCTT
ATCCTGAAATTTATGCTAAGGAATTATTAGTTCTTGATGTAGGTACAACTTTATCAGTATTACGTAGTTGGAAAGTCAGT
AAAAGCGAAACTTGGGTTAGGGTTGAATTAGCTTCTAATAAATTCTTAGATGATCCTAATATGATTTTAAAAGGTTGGAT
AAAAATGTAA

Upstream 100 bases:

>100_bases
CTGACAGAATATTTAATATATTAATGGGAGATAAAGTTGCACCAAGAAGAGAATTTATTGAAACCCATAGTGGCAACTTA
GATATGGCAACTTTAGACAT

Downstream 100 bases:

>100_bases
ATTTTGGATTTTAGTTCAATAAGTATAATTTTACTCGGCAGTACTTTTGGATTAATACTTAGGATATTCATACAAAATAA
TTTTAAAAAAAGTATAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MINNVLKNFCLITFALIAPITLPAGGIQRSLNQNKFPNNTNEIILSSKASLYSYPEIYAKELLVLDVGTTLSVLRSWKVS
KSETWVRVELASNKFLDDPNMILKGWIKM

Sequences:

>Translated_109_residues
MINNVLKNFCLITFALIAPITLPAGGIQRSLNQNKFPNNTNEIILSSKASLYSYPEIYAKELLVLDVGTTLSVLRSWKVS
KSETWVRVELASNKFLDDPNMILKGWIKM
>Mature_109_residues
MINNVLKNFCLITFALIAPITLPAGGIQRSLNQNKFPNNTNEIILSSKASLYSYPEIYAKELLVLDVGTTLSVLRSWKVS
KSETWVRVELASNKFLDDPNMILKGWIKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12303; Mature: 12303

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNVLKNFCLITFALIAPITLPAGGIQRSLNQNKFPNNTNEIILSSKASLYSYPEIYAK
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ELLVLDVGTTLSVLRSWKVSKSETWVRVELASNKFLDDPNMILKGWIKM
HEEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MINNVLKNFCLITFALIAPITLPAGGIQRSLNQNKFPNNTNEIILSSKASLYSYPEIYAK
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
ELLVLDVGTTLSVLRSWKVSKSETWVRVELASNKFLDDPNMILKGWIKM
HEEEEECCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA