| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is mreC [C]
Identifier: 123969363
GI number: 123969363
Start: 1562880
End: 1563629
Strand: Reverse
Name: mreC [C]
Synonym: A9601_18311
Alternate gene names: 123969363
Gene position: 1563629-1562880 (Counterclockwise)
Preceding gene: 123969364
Following gene: 123969362
Centisome position: 93.64
GC content: 30.27
Gene sequence:
>750_bases ATGTTAGTTATCCGACGAATTTCTAATAGTCGTTGGTGGCATAAAAAGAAAAATTGGCTATTTTTTGCAATTTTTTTATT TTTGGTTTTTGTAAGAATATCAAAAGGAGCTTTTTATAAAGATTTTTATTATTTTATTTCAAAACCTTTTTGGCCTGGTC AATTTCAAAAAGAAATTGTTCTTAAAAGTATTGATCAAGAATATTTAATAAAGTTAAATCTTCTTAAAAAAGATAATATA AGACTGCGACAAATCTTATCTCTTCAGGAATCATCTAATGATGAACATATTTCAGCTGCAGTTATTTCGCGAAAAACAGG TAGTTGGTGGAGACAAATAATTTTAAACAAAGGTTCAAAGGATGGAGTAGAAATTGGCAATATTGTGATTGGTCCAGGTG GATTATTAGGTAGAGTAAAGAATACTTCTTTATTCACTTCGTCGGTAACTTTAATAACTTCTCCAGAAAGTAAGTTAGGC GTTTGGGTGGATAGAATTCAAATCAATGGATTACTAGTTGGTTCAGGAGATGATTATCCTAGCCTAATACTCTATTCAAA AGATGCCGATATTAAAGTCGGAGATTTTGTATCATCATCTCCAGCTAGTACGTTATTACCTCCAAATATCCCTATTGGTA TTGTCCAATCTATAGATGAGACGTTGAAATCAAAAAAAACGGCAAAAATTTCACTTTTAGGAAAACCTCATGTAATTGAT TGGGTCAAAATTTTGAAAGTAAATATTTAA
Upstream 100 bases:
>100_bases GTAGTGAATGGTTGTGGAGAGGTGTTGGATGATTTTAAAAAACTCAAAAGAGTTGTTGACACTCCAGAATTTATAAGGAA TGCCATAAGAGATTAATGTT
Downstream 100 bases:
>100_bases TGATTAAATTTCTTACAAAAAAATTATCCATAATAAGCTTTATTTTTATCCCAATTATTTTTTTGTGGCACCCTAATTGG CTTGGATTTTTAGGTGTTCA
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Cell Shape-Determining Protein
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLVIRRISNSRWWHKKKNWLFFAIFLFLVFVRISKGAFYKDFYYFISKPFWPGQFQKEIVLKSIDQEYLIKLNLLKKDNI RLRQILSLQESSNDEHISAAVISRKTGSWWRQIILNKGSKDGVEIGNIVIGPGGLLGRVKNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGSGDDYPSLILYSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETLKSKKTAKISLLGKPHVID WVKILKVNI
Sequences:
>Translated_249_residues MLVIRRISNSRWWHKKKNWLFFAIFLFLVFVRISKGAFYKDFYYFISKPFWPGQFQKEIVLKSIDQEYLIKLNLLKKDNI RLRQILSLQESSNDEHISAAVISRKTGSWWRQIILNKGSKDGVEIGNIVIGPGGLLGRVKNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGSGDDYPSLILYSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETLKSKKTAKISLLGKPHVID WVKILKVNI >Mature_249_residues MLVIRRISNSRWWHKKKNWLFFAIFLFLVFVRISKGAFYKDFYYFISKPFWPGQFQKEIVLKSIDQEYLIKLNLLKKDNI RLRQILSLQESSNDEHISAAVISRKTGSWWRQIILNKGSKDGVEIGNIVIGPGGLLGRVKNTSLFTSSVTLITSPESKLG VWVDRIQINGLLVGSGDDYPSLILYSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETLKSKKTAKISLLGKPHVID WVKILKVNI
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28188; Mature: 28188
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIRRISNSRWWHKKKNWLFFAIFLFLVFVRISKGAFYKDFYYFISKPFWPGQFQKEIV CEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH LKSIDQEYLIKLNLLKKDNIRLRQILSLQESSNDEHISAAVISRKTGSWWRQIILNKGSK HHHCCHHHEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCC DGVEIGNIVIGPGGLLGRVKNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGSGDDYP CCEEECCEEECCCHHEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC SLILYSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETLKSKKTAKISLLGKPHVID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH WVKILKVNI EEEEEEECC >Mature Secondary Structure MLVIRRISNSRWWHKKKNWLFFAIFLFLVFVRISKGAFYKDFYYFISKPFWPGQFQKEIV CEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHH LKSIDQEYLIKLNLLKKDNIRLRQILSLQESSNDEHISAAVISRKTGSWWRQIILNKGSK HHHCCHHHEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCC DGVEIGNIVIGPGGLLGRVKNTSLFTSSVTLITSPESKLGVWVDRIQINGLLVGSGDDYP CCEEECCEEECCCHHEECCCCCEEEEEEEEEEECCCHHHCEEEEEEEEEEEEEECCCCCC SLILYSKDADIKVGDFVSSSPASTLLPPNIPIGIVQSIDETLKSKKTAKISLLGKPHVID EEEEEECCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH WVKILKVNI EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA