| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969322
Identifier: 123969322
GI number: 123969322
Start: 1524781
End: 1525338
Strand: Reverse
Name: 123969322
Synonym: A9601_17901
Alternate gene names: NA
Gene position: 1525338-1524781 (Counterclockwise)
Preceding gene: 123969325
Following gene: 123969320
Centisome position: 91.34
GC content: 31.9
Gene sequence:
>558_bases ATGTCATATTCCTTAAATTCTACATTATTGCTGACAATTCTCTTAGCCATAGGATTATTTTTTTTTCTTAGGGCTTCCAG TAAAGATAGAACAACCATCGTTGAGATTTCATCTTCTCAGAAGCCAATTAAGGTTTTAAATGGTTTATGTGAATGGCTTA ATTTGAGGGGATGGAAGCAAACAGGAGGAGATTTTGAACAAAGAATTTTAATATTTAAGGGTCAAGTTGTTTCTAGTAAA TTTTTAGCAATTTTTTTAGGTTTTCTTGGCGGTTTTGGTTCTTGTGCTTTGGGATTAGTAATTATTCAAATATATCCCGA ATTAGGTTGGTGGCCTATTCTTTTGGGATTAATTGGTGGCCCTTTGTCTGGAATTGTTTACTTTAAAAAATCAGCTAGAG AGGAGAAATTTGAATTAAGGTTGCTAAATGAAAATGAAAATGATTCAACTTTTATGAGACTTAGAGCCCATAGGGATGAA TTAATCTCTTTAGAAAATGAACTCGGAGAAAAACTTCAATTGAAAAGTGACGGTTCTTTATTTAAAACACCTATTTAA
Upstream 100 bases:
>100_bases AATTTTTATCTAATGGGAATATTTTACAGAACAATTCTAAAAAATTATAATAAGATGTAACTTTAATTTTTATTCTCGAG TTACTAGAAAAAATTATTTA
Downstream 100 bases:
>100_bases GATACTTGAAAATTTTATTTGATAATTTTTAATCAAAAATATTATTCTCCATACAGAATTTTTCTAACTCTTTATCATTA AACCAATCTTGGGGTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSYSLNSTLLLTILLAIGLFFFLRASSKDRTTIVEISSSQKPIKVLNGLCEWLNLRGWKQTGGDFEQRILIFKGQVVSSK FLAIFLGFLGGFGSCALGLVIIQIYPELGWWPILLGLIGGPLSGIVYFKKSAREEKFELRLLNENENDSTFMRLRAHRDE LISLENELGEKLQLKSDGSLFKTPI
Sequences:
>Translated_185_residues MSYSLNSTLLLTILLAIGLFFFLRASSKDRTTIVEISSSQKPIKVLNGLCEWLNLRGWKQTGGDFEQRILIFKGQVVSSK FLAIFLGFLGGFGSCALGLVIIQIYPELGWWPILLGLIGGPLSGIVYFKKSAREEKFELRLLNENENDSTFMRLRAHRDE LISLENELGEKLQLKSDGSLFKTPI >Mature_184_residues SYSLNSTLLLTILLAIGLFFFLRASSKDRTTIVEISSSQKPIKVLNGLCEWLNLRGWKQTGGDFEQRILIFKGQVVSSKF LAIFLGFLGGFGSCALGLVIIQIYPELGWWPILLGLIGGPLSGIVYFKKSAREEKFELRLLNENENDSTFMRLRAHRDEL ISLENELGEKLQLKSDGSLFKTPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20804; Mature: 20672
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYSLNSTLLLTILLAIGLFFFLRASSKDRTTIVEISSSQKPIKVLNGLCEWLNLRGWKQ CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC TGGDFEQRILIFKGQVVSSKFLAIFLGFLGGFGSCALGLVIIQIYPELGWWPILLGLIGG CCCCHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PLSGIVYFKKSAREEKFELRLLNENENDSTFMRLRAHRDELISLENELGEKLQLKSDGSL CHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE FKTPI ECCCC >Mature Secondary Structure SYSLNSTLLLTILLAIGLFFFLRASSKDRTTIVEISSSQKPIKVLNGLCEWLNLRGWKQ CCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCC TGGDFEQRILIFKGQVVSSKFLAIFLGFLGGFGSCALGLVIIQIYPELGWWPILLGLIGG CCCCHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PLSGIVYFKKSAREEKFELRLLNENENDSTFMRLRAHRDELISLENELGEKLQLKSDGSL CHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE FKTPI ECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA